DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPOM_SPBC1652.02

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_596769.2 Gene:SPOM_SPBC1652.02 / 2540163 PomBaseID:SPBC1652.02 Length:594 Species:Schizosaccharomyces pombe


Alignment Length:574 Identity:129/574 - (22%)
Similarity:216/574 - (37%) Gaps:137/574 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VPTKTTSNGTMCANGSLGTEGPEAPETDSSGTG-----RMRKPLERNGSTQNH-------VVHLE 81
            ||:.|..|||:           |:.:..|.||.     |..|....|...:.|       ..||:
pombe    22 VPSTTNGNGTI-----------ESYKEKSVGTSFLDFFRSYKLRPDNEFAEVHNSEDFLKPRHLQ 75

  Fly    82 RRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT--GSVGVSFIIWLACGVLSLLGALAYAELGTM- 143
                     .:.:|:.||:|:|||....|...  ||:.::||| |:..:|:|:     ..||.| 
pombe    76 ---------MIAIGSCIGTGLFVSTGKSLKNAGPGSLMINFII-LSAMILALI-----LSLGEMC 125

  Fly   144 ----NTSSGAEWA--YFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTE-CDPP 201
                |.||...:.  ...:..|.|.::|:.|:...|| ||:::..|     ..|:.:.|: .:|.
pombe   126 CFLPNQSSITMYTGRLLNNNIGFAQSWLYFWIWLTVL-PSEISAAC-----EVVDFWTTQHLNPA 184

  Fly   202 RGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVI---------CGGAWK--LMQ 255
            ..|...:|.|.:|.......|.       :..|.::.|..|:|:|         ||.|.|  .:.
pombe   185 IWVTIFLAYVVLVNAFGARSYG-------ECEFVSSFLKVVIVIIFFFVAIIINCGAAPKGGYIG 242

  Fly   256 GNTQH----LSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSI------ 310
            .:..|    ..|.|.|       ..:.|.:..::..|..|:........||.:.:|.::      
pombe   243 AHYWHHPGSFRNGFKG-------FCSVFISSAYSLSGTENIGTAAGNTSNPQRAIPSAVKKVFYR 300

  Fly   311 -----IIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGS 370
                 ||.|.|:||.....|.. |..:||        ..:...|..:..|..:....:.:|....
pombe   301 MGFFYIITIFLITLVVPYDNPD-LGNVSP--------FIIAIKNGGIHVLPHITNAVILVSVLSV 356

  Fly   371 ANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLH------GTI--DS 427
            .|..:|||.|...|..::|.....|..|..:   ..|.:.:...:|.|.:.:      |::  |.
pombe   357 GNAAVFAASRNAMALVKQGWAPRFLGRVDQK---GRPVISYLCSLAMACIAYVNAAPDGSVVFDW 418

  Fly   428 LIDFFSFTAWIFYGGAMLALIVMRYTK-----PNYPRPYKVP---------IIIPVVVLVISVYL 478
            |:......|::.:|.:.:..|.:||..     |:...|||.|         ::|..:.|...||:
pombe   419 LMSVSGGGAFVIWGLSFIDHIRLRYAMKAQKIPDTVLPYKFPGSVYLSYYGVLINFLALCALVYI 483

  Fly   479 VAAPI-FETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFMNKVTLFFQLLLEV 531
            ...|: .|.|..   |.....|.|...::.:  |.::|.|:...   ||.|.:|
pombe   484 SIFPVTHEKPSA---YGFFVSFLGPSVFIAY--LLISPIFVKPT---FQSLKDV 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 122/550 (22%)
SPOM_SPBC1652.02NP_596769.2 AA_permease_2 69..532 CDD:459263 115/516 (22%)

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