DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPBC15C4.04c

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_595924.1 Gene:SPBC15C4.04c / 2539903 PomBaseID:SPBC15C4.04c Length:542 Species:Schizosaccharomyces pombe


Alignment Length:491 Identity:119/491 - (24%)
Similarity:189/491 - (38%) Gaps:94/491 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 GLFSGVALIVGT----MIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNT 145
            |||   |.:|.|    :|..|   :||.:.           .||..|...:..||:.|||.:...
pombe    75 GLF---ATVVTTYSYPLISGG---APSAVW-----------CWLIAGAGCMCIALSVAELVSAYP 122

  Fly   146 SSGAEWAYFMDAYG----PAPAFLFSWVSTLVLKPSQMAIIC---LSFAQYAVEAFVTECD---- 199
            :||..:....|...    |..|::..|::.|    .|.|.:.   .|.||..:.|.....|    
pombe   123 TSGGLYFTCKDLVPARSMPVVAWVVGWLNLL----GQAAGVSSTDWSCAQLLLAAVSISTDLKYI 183

  Fly   200 PPRGVVKMVALVAIVMILFVNCYSVN-LGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHL-- 261
            |....:..|....||....||..|.. |....:...|...:|.||.:||..| |..:.||...  
pombe   184 PTNQHIVGVMAAVIVFHGLVNSLSTRWLDRITRFYATFHLIVLVVCMICLLA-KCPKFNTGKYVF 247

  Fly   262 --SNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALI 324
              ..|.:|..|...:....|.:..|....::...::.|||:|.:...|.:|.:.:.:..:...:.
pombe   248 TDVQASSGWHPIGFSFLFGFLSVAWCMTDYDATAHIAEEIENAAVRAPNAIALALSITYVLGWVF 312

  Fly   325 NI--SYLAAMSPQEMIESE---AVAVTFGNRILGALAWLMPLSVTISTFGSANGT----LFAAGR 380
            ||  ::........:|.||   .||..|.| :||...   .::.||.:|...|.|    :.|..|
pombe   313 NIVLAFTMGTDLDSLINSELGQPVAQIFYN-VLGKKG---SMAFTILSFIIINFTGITAMQANAR 373

  Fly   381 LCFAASREGHLLDILSYVHVRRLTPAP------GLIFHSLIASAMVLHGTIDSLIDFFSFTA--- 436
            ..:|.||:..|.....:..:.:.|..|      .::|  .||..::..|:|:::...||..|   
pombe   374 TIWAFSRDQALPFSRYWYKINKTTTTPVIAVWLNVVF--CIALNLIGLGSIEAIEAIFSVCAIAL 436

  Fly   437 -WIFYGGAMLALIVMRYTKPNY-PRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLF-I 498
             |.:.......||..:  :.|| |.|:.         |..:.:.|.|           ||:.: .
pombe   437 DWSYVIPIACKLIFGK--RLNYKPGPWN---------LGWASHFVNA-----------YAVCWTA 479

  Fly   499 FAGLIFYVPFVKLGMTPRFMN--KVTLFFQLLLEVV 532
            |..:||.:|.|: .:||:.||  .|.|...||..:|
pombe   480 FVSVIFLMPTVR-PVTPQNMNYAVVVLAGVLLFSLV 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 118/489 (24%)
SPBC15C4.04cNP_595924.1 2A0304 48..527 CDD:273331 119/491 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I2614
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I1915
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.050

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