DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and agp3

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_588521.1 Gene:agp3 / 2539173 PomBaseID:SPCC965.11C Length:537 Species:Schizosaccharomyces pombe


Alignment Length:538 Identity:114/538 - (21%)
Similarity:202/538 - (37%) Gaps:114/538 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 VPTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALI 93
            ||.|..|:......|.......:|.|.:|:|..|        |....||          |.:|| 
pombe     9 VPAKKLSSSENLDIGVSEVVTVDAAENNSNGIKR--------GLKTRHV----------SMMAL- 54

  Fly    94 VGTMIGSGIFV---------SPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGA 149
             ..:||.|:|:         .|.||:|  |...||.:::   ||:..:|  .:..|...|.::.|
pombe    55 -AGIIGPGVFIGMGSALHIGGPVGLIV--GFAIVSIVVF---GVMLSIG--EFNSLFDFNFNTHA 111

  Fly   150 EWAYFMD-AYGPAPA--FLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALV 211
              |.::| |:|.|..  ::..|::.:..:.:.:..|...:..:.         |..|..      
pombe   112 --ARWVDPAFGAAIGWNYVIVWLTNIAAEYTSLTSILQYWGPHV---------PSYGFF------ 159

  Fly   212 AIVMILFVNCYSVNLGMAV----QNVFTAAKLVAV------VVVICGGAWKLMQGNTQHLSNAFN 266
             ::...|..||.: ||::|    :.:....||:.:      .::...|      |...|......
pombe   160 -LIFWGFFTCYQM-LGVSVFGESEYILAFIKLLFITGFYIFAIIYAAG------GIPHHKPPNLF 216

  Fly   267 GPMP---NVGAIATAF-YTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINIS 327
            ..||   ..|.|.:|| |.|:: :.|..:::....|.|||.|.:|.::......:...|..|:||
pombe   217 KEMPLAHGFGGIVSAFVYAGVF-FSGVESVSMTAAESKNPKKAIPLAVRQTFWRILYVYFGISIS 280

  Fly   328 Y---LAAMSPQEMIESEAVAVTFGNRILGALAW-----LMPLSVTISTFGSANGTLFAAGRLCFA 384
            |   :|...|.....|:.:.......|:.| .|     .:...:.|:...|.|..::...|..:.
pombe   281 YGITVAWNDPNLSSGSKTLKSPMTIAIMNA-GWNHAGDFVNAVILITCLSSINSGIYIGSRSLYN 344

  Fly   385 ASREGHLLDILSYVHVRRLTPAPGLIFHSL-----------IASAMVLHGTIDSLIDFFSFTAWI 438
            .:::|....|...|..|.:   |.:..||:           ...|:..:|.|.:|....:|..|.
pombe   345 LAKDGMAPKIFKRVDKRGV---PWVAVHSVHLFGFLSIMNYSTGAVKAYGYIINLAGVSAFIVWT 406

  Fly   439 --------FYGGAM---LALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYL 492
                    |..|.:   .||..:.:..|.||.|..:..:|.:::.::..:.|..|......|: .
pombe   407 AIIFVHFRFRRGWVKQGYALSDLPFKSPLYPFPQLIGFVIGIILTLVQGWTVFKPFAAGDFVD-A 470

  Fly   493 YALLFIFAGLIFYVPFVK 510
            |.||.:|..:.....|:|
pombe   471 YILLPLFFVIWLSYKFIK 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 108/514 (21%)
agp3NP_588521.1 AA_permease_2 41..499 CDD:459263 105/506 (21%)

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