DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPCPB1C11.02

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_588425.1 Gene:SPCPB1C11.02 / 2539031 PomBaseID:SPCPB1C11.02 Length:505 Species:Schizosaccharomyces pombe


Alignment Length:518 Identity:116/518 - (22%)
Similarity:198/518 - (38%) Gaps:143/518 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIFV---------SPSGLLVRTGSVGVS-FIIWLACGVLSLLGA 134
            |.|.|.......|..|.:||:|:|:         .|:.||:....:||| :...||.|.:|:...
pombe    14 LHRSLSASQIQMLAFGGIIGTGLFLGIGSSLAESGPASLLISFSVLGVSVYCTMLALGEMSVYMP 78

  Fly   135 LAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW----VSTLVLKPSQMAIICLSFAQYAVEAFV 195
            :|    |:..|..|.    ::|   .|.:|..:|    ..|:.|....:|      .:..|:.::
pombe    79 VA----GSFCTYVGR----YVD---EALSFSLTWNYWLNDTIALASHVLA------TRLVVDFWL 126

  Fly   196 --TECDPPRGVVKM------VALVAIVMILFVNCY----------SVNLGMAVQNVFTAAKLVAV 242
              ||.||....:.:      |.::..:..|..|..          .:...::...|||.|..: |
pombe   127 IPTEGDPVSASLSLPPWKEAVRIITPITSLSANIILNMLPVGGFGEIEYWLSSIKVFTVAAFI-V 190

  Fly   243 VVVICG-GA-----------WKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYV 295
            ..::|. |.           ||        ...|||..:  :|.| ::|....:||.|..::...
pombe   191 NGILCNLGVNNEKKFIGFRYWK--------DPGAFNNGI--IGVI-SSFVNAAFAYAGTESIALT 244

  Fly   296 TEEIKNPSKNLPRSIIIGIPLVTLCYAL------INISY--------LAAMSPQEMIESEAVAVT 346
            ..|.|:|...||::|......|.|.|.:      ||:.|        ...|||...:..:     
pombe   245 AGEAKSPITTLPKAIRFTAHRVLLLYIISVLVVGINLPYNTPGLDGDSVRMSPFTFVFKK----- 304

  Fly   347 FGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIF 411
            ||  :.|| |.:|.|.:..|...:.|.:|:|..||.::.::.||...:.|..:...:   |.|..
pombe   305 FG--VPGA-ASIMNLVILSSALSAGNHSLYAGTRLLYSLAKSGHAPKVFSKCNKHGI---PWLSV 363

  Fly   412 HSLIASAMV---------LHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTK------------- 454
            .:..|:|::         ..|.:.::|...:..:|||     :|:..:|:.|             
pombe   364 LATSATAILCLMSSQAGKTWGFLLNVIAVSNQISWIF-----IAVSSLRFRKALRVQGKTHRLYF 423

  Fly   455 PN--YP-RPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYAL-LFIFAGLIFYVPFVKLGM 513
            ||  || .||       :::|:..|:|.      ....:.||.. |.:|......:|.| ||:
pombe   424 PNWTYPVGPY-------IIILLNGVFLF------LQGYKSLYPFRLSLFVSYYMEIPIV-LGL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 116/518 (22%)
SPCPB1C11.02NP_588425.1 2A0310 16..485 CDD:273334 115/516 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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