DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and SPOM_SPCPB1C11.02

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_588425.1 Gene:SPOM_SPCPB1C11.02 / 2539031 PomBaseID:SPCPB1C11.02 Length:505 Species:Schizosaccharomyces pombe


Alignment Length:518 Identity:116/518 - (22%)
Similarity:198/518 - (38%) Gaps:143/518 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LERRLGLFSGVALIVGTMIGSGIFV---------SPSGLLVRTGSVGVS-FIIWLACGVLSLLGA 134
            |.|.|.......|..|.:||:|:|:         .|:.||:....:||| :...||.|.:|:...
pombe    14 LHRSLSASQIQMLAFGGIIGTGLFLGIGSSLAESGPASLLISFSVLGVSVYCTMLALGEMSVYMP 78

  Fly   135 LAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW----VSTLVLKPSQMAIICLSFAQYAVEAFV 195
            :|    |:..|..|.    ::|   .|.:|..:|    ..|:.|....:|      .:..|:.::
pombe    79 VA----GSFCTYVGR----YVD---EALSFSLTWNYWLNDTIALASHVLA------TRLVVDFWL 126

  Fly   196 --TECDPPRGVVKM------VALVAIVMILFVNCY----------SVNLGMAVQNVFTAAKLVAV 242
              ||.||....:.:      |.::..:..|..|..          .:...::...|||.|..: |
pombe   127 IPTEGDPVSASLSLPPWKEAVRIITPITSLSANIILNMLPVGGFGEIEYWLSSIKVFTVAAFI-V 190

  Fly   243 VVVICG-GA-----------WKLMQGNTQHLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYV 295
            ..::|. |.           ||        ...|||..:  :|.| ::|....:||.|..::...
pombe   191 NGILCNLGVNNEKKFIGFRYWK--------DPGAFNNGI--IGVI-SSFVNAAFAYAGTESIALT 244

  Fly   296 TEEIKNPSKNLPRSIIIGIPLVTLCYAL------INISY--------LAAMSPQEMIESEAVAVT 346
            ..|.|:|...||::|......|.|.|.:      ||:.|        ...|||...:..:     
pombe   245 AGEAKSPITTLPKAIRFTAHRVLLLYIISVLVVGINLPYNTPGLDGDSVRMSPFTFVFKK----- 304

  Fly   347 FGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIF 411
            ||  :.|| |.:|.|.:..|...:.|.:|:|..||.::.::.||...:.|..:...:   |.|..
pombe   305 FG--VPGA-ASIMNLVILSSALSAGNHSLYAGTRLLYSLAKSGHAPKVFSKCNKHGI---PWLSV 363

  Fly   412 HSLIASAMV---------LHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTK------------- 454
            .:..|:|::         ..|.:.::|...:..:|||     :|:..:|:.|             
pombe   364 LATSATAILCLMSSQAGKTWGFLLNVIAVSNQISWIF-----IAVSSLRFRKALRVQGKTHRLYF 423

  Fly   455 PN--YP-RPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYAL-LFIFAGLIFYVPFVKLGM 513
            ||  || .||       :::|:..|:|.      ....:.||.. |.:|......:|.| ||:
pombe   424 PNWTYPVGPY-------IIILLNGVFLF------LQGYKSLYPFRLSLFVSYYMEIPIV-LGL 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 116/518 (22%)
SPOM_SPCPB1C11.02NP_588425.1 LysP 9..495 CDD:440595 116/518 (22%)

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