DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and Y53F4B.12

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001293550.1 Gene:Y53F4B.12 / 190214 WormBaseID:WBGene00013159 Length:762 Species:Caenorhabditis elegans


Alignment Length:481 Identity:98/481 - (20%)
Similarity:178/481 - (37%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 MRKPLERNGSTQNHVVHLE--RRLGLFSGVALIVGTMIGSGIFV----------SPSGLLVRTGS 115
            ::|.|......:..:.|.|  ||||:...|||.....|...:|:          .||.:|   ..
 Worm     5 LQKMLRTRRVDEQFLRHSEWARRLGVPLMVALAGIKSISMMLFIILPFSLTQVAGPSTVL---AP 66

  Fly   116 VGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMA 180
            :....||:.:...||        ||......:..::.:.....|..|||:.:|:| ||...:|..
 Worm    67 IFAFLIIFFSAAHLS--------ELSCTMPKNCVQYHFAYAVIGELPAFVIAWIS-LVDYVAQAG 122

  Fly   181 IICLSFAQY-------------AVEAFVTE---CDPPRGVVKMVALVAIVMILFVNCYSVNLGMA 229
            :.|.::|.:             ..:.|.|:   ..|.  |..:..|.||:.:..:.|       :
 Worm   123 LFCKAWADHFNLLFRGLPAKSLTFDVFSTDSMLLSPQ--VDLLTVLSAIITLCLLLC-------S 178

  Fly   230 VQNVFT-AAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTG----LWA---- 285
            ::.|.| ...|:||.::|......:          ||....|.....|..|:.|    |:|    
 Worm   179 LRVVGTICVSLLAVTLLIAASCTMV----------AFFHSDPENWIKAEFFHFGYQGVLYAICAL 233

  Fly   286 ---YDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISY-----LAAMSPQEMIESEA 342
               |.|..:.:.:.||.|||.|.:...:...:.::|..:.:::|::     :.|:|...||....
 Worm   234 CACYTGIESTSCLLEETKNPRKRISGVLSFLVLVLTTIFFVLSITFSLSTNVTALSEGIMIPEVF 298

  Fly   343 VAVTFGNRILGALAWL--MPL----------SVTISTFGSANGTLFAAGR----LCFAASREGHL 391
            ..:........:..|:  .|:          |::.|.|.|.....|...|    :|...:..|.:
 Worm   299 SVINIPAAKSSSKHWVRRFPMISPSESATSSSISPSAFRSYYEQGFIRMRYMLSVCSVCALSGGV 363

  Fly   392 LD--------ILSYVHVRRL-------TPAP---GLIFHSLIASAMVLHGTIDSLIDFFSFTAWI 438
            |.        |.:..|.|.:       |.:|   .|:...|:|...::..|:  |::|..|.|.:
 Worm   364 LASFLPATRVIAALCHDRLIPYAKDTSTKSPYFAVLLCTVLVALCSMIQKTM--LLNFVIFMAPV 426

  Fly   439 FYGGAMLALIVMRYTKPNYPRPYKVP 464
                .::..|::.|.:..||....:|
 Worm   427 ----KLVITILLVYLQHYYPEQIGIP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 98/481 (20%)
Y53F4B.12NP_001293550.1 PotE 26..437 CDD:440297 90/447 (20%)

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