DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and Y53F4B.12

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001293550.1 Gene:Y53F4B.12 / 190214 WormBaseID:WBGene00013159 Length:762 Species:Caenorhabditis elegans


Alignment Length:481 Identity:98/481 - (20%)
Similarity:178/481 - (37%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 MRKPLERNGSTQNHVVHLE--RRLGLFSGVALIVGTMIGSGIFV----------SPSGLLVRTGS 115
            ::|.|......:..:.|.|  ||||:...|||.....|...:|:          .||.:|   ..
 Worm     5 LQKMLRTRRVDEQFLRHSEWARRLGVPLMVALAGIKSISMMLFIILPFSLTQVAGPSTVL---AP 66

  Fly   116 VGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMA 180
            :....||:.:...||        ||......:..::.:.....|..|||:.:|:| ||...:|..
 Worm    67 IFAFLIIFFSAAHLS--------ELSCTMPKNCVQYHFAYAVIGELPAFVIAWIS-LVDYVAQAG 122

  Fly   181 IICLSFAQY-------------AVEAFVTE---CDPPRGVVKMVALVAIVMILFVNCYSVNLGMA 229
            :.|.::|.:             ..:.|.|:   ..|.  |..:..|.||:.:..:.|       :
 Worm   123 LFCKAWADHFNLLFRGLPAKSLTFDVFSTDSMLLSPQ--VDLLTVLSAIITLCLLLC-------S 178

  Fly   230 VQNVFT-AAKLVAVVVVICGGAWKLMQGNTQHLSNAFNGPMPNVGAIATAFYTG----LWA---- 285
            ::.|.| ...|:||.::|......:          ||....|.....|..|:.|    |:|    
 Worm   179 LRVVGTICVSLLAVTLLIAASCTMV----------AFFHSDPENWIKAEFFHFGYQGVLYAICAL 233

  Fly   286 ---YDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISY-----LAAMSPQEMIESEA 342
               |.|..:.:.:.||.|||.|.:...:...:.::|..:.:::|::     :.|:|...||....
 Worm   234 CACYTGIESTSCLLEETKNPRKRISGVLSFLVLVLTTIFFVLSITFSLSTNVTALSEGIMIPEVF 298

  Fly   343 VAVTFGNRILGALAWL--MPL----------SVTISTFGSANGTLFAAGR----LCFAASREGHL 391
            ..:........:..|:  .|:          |::.|.|.|.....|...|    :|...:..|.:
 Worm   299 SVINIPAAKSSSKHWVRRFPMISPSESATSSSISPSAFRSYYEQGFIRMRYMLSVCSVCALSGGV 363

  Fly   392 LD--------ILSYVHVRRL-------TPAP---GLIFHSLIASAMVLHGTIDSLIDFFSFTAWI 438
            |.        |.:..|.|.:       |.:|   .|:...|:|...::..|:  |::|..|.|.:
 Worm   364 LASFLPATRVIAALCHDRLIPYAKDTSTKSPYFAVLLCTVLVALCSMIQKTM--LLNFVIFMAPV 426

  Fly   439 FYGGAMLALIVMRYTKPNYPRPYKVP 464
                .::..|::.|.:..||....:|
 Worm   427 ----KLVITILLVYLQHYYPEQIGIP 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 98/481 (20%)
Y53F4B.12NP_001293550.1 2A0303 3..>407 CDD:273330 87/432 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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