DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and aat-6

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_505905.2 Gene:aat-6 / 188421 WormBaseID:WBGene00000007 Length:523 Species:Caenorhabditis elegans


Alignment Length:478 Identity:157/478 - (32%)
Similarity:255/478 - (53%) Gaps:38/478 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 RRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTS 146
            :::||...::.|||.::|||||::|:.::....|||:|..||:....:|:||:..|.||||....
 Worm    18 QKMGLLGAISYIVGNIVGSGIFITPTSIIENVNSVGLSLAIWILAAFISMLGSFCYVELGTSIRL 82

  Fly   147 SGAEWAY--FMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPR--GVVKM 207
            ||.::||  ||..| |. ||.|..:...:..|:.:|:...:||:|.......|.|...  ...|:
 Worm    83 SGGDFAYLCFMKWY-PV-AFAFMCIGCTINYPATLAVQAQTFAEYVFRGAGVELDETSEFWAKKL 145

  Fly   208 VALVAIVMILFVNCYSVNLGMAVQNVFTA-AKLVAVVVVICGG-------AWKLMQGNTQHLSNA 264
            :....|::::|:|.:|:...:...::..: ||:.|.:::|..|       .||      |:|...
 Worm   146 LGFSLIILLMFMNFFSLKTFVQRFSILASLAKIAATLLIIITGFYYLIFKHWK------QNLEEP 204

  Fly   265 FNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYL 329
            |.|...|.|....|.:.||::||||:.||:..|||:||.:.:|.|||||:..:.:.|..:|::|.
 Worm   205 FKGSNWNPGPFVNALFAGLFSYDGWDILNFGAEEIENPKRTMPLSIIIGMTCIGVIYVAVNVAYS 269

  Fly   330 AAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDI 394
            ..:||.|||.|.|||:.|.|:.|||.|:::|:.|.|...||.|.|:|:|.|...|.||:||:...
 Worm   270 IVLSPTEMIASNAVAIDFANKTLGAAAFVVPVMVAILLIGSLNSTMFSASRYLQAVSRQGHIPSA 334

  Fly   395 LSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYT-KPNYP 458
            :|.:.....:|...|:.|.|||.|:...|..|.||::.:|..|......|.||:.:|.. :|.:|
 Worm   335 ISGIAPNCDSPRVALLVHILIAIAVSFLGDPDKLINYVAFAQWSQRAFTMSALLYLRIRGRPRHP 399

  Fly   459 RPYKVPIIIPVVVLVISVYLVAAPI---FETPRVEYLYALLFIFAGLIFYVPFV---KLGMTPRF 517
            ...::|||:|::..::...:|...|   |::..|    .|..:..|||.::.||   .|..:..|
 Worm   400 DRIQLPIIMPILFFLVCTSMVVISIIDDFKSSAV----GLGILLGGLIIFIIFVWDRALPSSHTF 460

  Fly   518 MN-------KVTLFFQLLLEVVP 533
            .|       :.|.|.|::..|||
 Worm   461 RNATHVINEESTKFMQIIFNVVP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 154/475 (32%)
aat-6NP_505905.2 2A0308 18..482 CDD:273332 154/475 (32%)

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