DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and aat-8

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_500425.2 Gene:aat-8 / 185079 WormBaseID:WBGene00000009 Length:483 Species:Caenorhabditis elegans


Alignment Length:468 Identity:160/468 - (34%)
Similarity:249/468 - (53%) Gaps:25/468 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNT 145
            :.::||....:.|||::||||||::|.|::...||||:|.|||:.|.:|:::.|:.|.||||...
 Worm     6 DNKIGLIGATSYIVGSIIGSGIFIAPKGIVEHAGSVGLSLIIWVFCALLNMITAINYIELGTSIP 70

  Fly   146 SSGAEWAYFMDAYGPAP-AFLFSWVSTLVLKPSQMAIICLSFAQYAVEAF-VTECDPPRGVVKMV 208
            .|||:.|| :|..|..| ||...|:|.|:...|..|::.|:|.:|.|:|. ...|....|.....
 Worm    71 ESGADLAY-IDYMGWTPIAFSLLWLSLLIQSSSSAAVLYLTFGKYLVQALEPIVCFTSSGADNCA 134

  Fly   209 ALVAIVMILFV---NCYSVN-LGMAVQNVFTAAKLVAVVVVI-CGGAWKLMQGNTQHL--SNAFN 266
            .|....::||:   |.:|:| ....||.:...:|:.|.:::| .|..:.:.:|.|.|.  |....
 Worm   135 KLFGFGLLLFLTLTNMFSLNKFAARVQIISMCSKIFATLIIIGIGFFFIIFRGATSHYRSSEIMK 199

  Fly   267 GPMPNVGAIATAFYTGLWAYDGWNNLNYVTEE--IKNPSKNLPRSIIIGIPLVTLCYALINISYL 329
            |...|.||||.|.|.|.||:.|:..|||.|||  |:|..|.|||:.:.|:.:..:.|.|:|:||.
 Worm   200 GSDWNAGAIALAIYQGNWAFGGFTTLNYGTEEIQIENFRKTLPRACLGGLLISAVIYVLVNVSYF 264

  Fly   330 AAMSPQEMIESEAVAVTFGNRILG-ALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLD 393
            |.::|||:|:|.|||.||..|.:| ..|:.:|..|.....|:.||.:|...|...|.||...:..
 Worm   265 AILTPQEIIDSSAVATTFIQRTVGNGPAFAVPAVVGFLLVGTLNGDVFGWSRYMVAGSRRKMMPT 329

  Fly   394 ILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTK-PNY 457
            ..|.:||...:|...:.||:|.:......|..|.|:|:.:.|..:....|:|.|:::::.| |..
 Worm   330 CFSLIHVDNDSPRVSVFFHTLTSIIFAFMGDTDQLVDYLTVTGMLTTIFALLVLVIIKWKKMPIA 394

  Fly   458 PRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFY--VPFVK-----LGMTP 515
            ..|.|..|..|::.|||.:.|:..||.:.|....:...:|: .|::.|  :.||.     ||:..
 Worm   395 SDPVKYSIFWPILNLVIMIALLVIPIQQDPLSSIIGFSMFL-GGVVVYFIIKFVVSHTEFLGVID 458

  Fly   516 RFMNKVTLFFQLL 528
               .|:|...|:|
 Worm   459 ---EKLTHLCQIL 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 160/468 (34%)
aat-8NP_500425.2 AA_permease_2 9..438 CDD:290254 150/430 (35%)
PT_UbiA <241..>324 CDD:294241 32/82 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.830

Return to query results.
Submit another query.