DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and aat-2

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_505394.2 Gene:aat-2 / 184126 WormBaseID:WBGene00000003 Length:483 Species:Caenorhabditis elegans


Alignment Length:481 Identity:179/481 - (37%)
Similarity:292/481 - (60%) Gaps:14/481 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 ERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLL 132
            |:......:.:.|:.|:.||:|..:|:|.:|||||||||.|:|:..||.|:|.:|||..||.:::
 Worm     3 EKEEEVSLNQIKLKPRISLFNGCTIIIGVIIGSGIFVSPKGVLLEAGSAGMSLLIWLLSGVFAMI 67

  Fly   133 GALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTE 197
            ||:.|:||||:...||.::||..:|:||.|:|||.||:.:::.|:.:|||.::.|.||::.|.: 
 Worm    68 GAVCYSELGTLIPKSGGDYAYIYEAFGPLPSFLFLWVALVIINPTSLAIIAITCATYALQPFYS- 131

  Fly   198 CDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVI-CGGAWKLMQGNTQHL 261
            |..|..||.:.|...|.::.|:||:.|.:.....:.||..||:|:.::| |||.| |..|:..:|
 Worm   132 CPVPDVVVNLFAGCIIAVLTFINCWDVRMATRTNDFFTITKLIALTLIITCGGYW-LSLGHIDNL 195

  Fly   262 --SNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALI 324
              .:...|....:.|||.|||:|::::.|::.||:||||:|||.:||||:|.|.||:||:.|.|:
 Worm   196 VMPDVAEGSQTKLSAIAMAFYSGVFSFSGFSYLNFVTEELKNPFRNLPRAIYISIPIVTIVYMLV 260

  Fly   325 NISYLAAMSPQEMIESEAVAVTFGNRILGALA--WLMPLSVTISTFGSANGTLFAAGRLCFAASR 387
            ||:|.:.::..|:::|:|||:||.::|||...  .||||.|:.|..||.||.|....|:.|:.:|
 Worm   261 NIAYFSVLTVDEILDSDAVAITFADKILGTFGSKILMPLFVSFSCVGSLNGILITCSRMFFSGAR 325

  Fly   388 EGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY 452
            ...|.::.:.:.:|:|||.|.|||....:..|:..|.:..||::.||...:....::..|:.:|:
 Worm   326 NSQLPELFAMISIRQLTPIPSLIFLGGTSIVMLFIGNVFQLINYLSFAESLVVFSSVAGLLKLRF 390

  Fly   453 TKPN---YPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMT 514
            |.|.   ..||.|:.::.|::..::.::|:..|.|.:...|.:|.:..:.:|:..||.||.....
 Worm   391 TMPENVLNARPIKISLLWPILFFLMCLFLLILPFFHSDPWELIYGVFLVLSGIPIYVLFVYNKYR 455

  Fly   515 PRFMNKV----TLFFQLLLEVVPTSS 536
            |.|:..|    |.|.|.|...||..|
 Worm   456 PGFIQSVWIGFTHFIQKLFYCVPELS 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 176/475 (37%)
aat-2NP_505394.2 2A0308 1..477 CDD:273332 176/475 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.810

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