DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and aat-1

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_501707.1 Gene:aat-1 / 177793 WormBaseID:WBGene00000002 Length:493 Species:Caenorhabditis elegans


Alignment Length:493 Identity:190/493 - (38%)
Similarity:293/493 - (59%) Gaps:25/493 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 EGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVR 112
            ||.|||:.::.|.|:                .||:.|.||:||::|||.:|||||||||:|:..:
 Worm    12 EGDEAPQNETEGKGK----------------GLEKSLTLFNGVSMIVGCIIGSGIFVSPTGVQEQ 60

  Fly   113 TGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPS 177
            .||||:|.|:||..|:.:.:||..||||||:...||.::||.|:|:||..||:..|:..:|::|.
 Worm    61 AGSVGLSLIVWLISGIFTAIGAYCYAELGTLIKKSGGDYAYIMEAFGPFVAFIRLWIEAIVVRPC 125

  Fly   178 QMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAV 242
            .:.|:.|:||.|.:..|..:|.||..|.:::|::.||::..:||.||.|...||:.||.||:||:
 Worm   126 TVTIVALTFAIYGLRPFFPDCAPPDVVAELLAILLIVLMTAINCISVRLATIVQDWFTIAKVVAL 190

  Fly   243 VVVICGGAWKLMQGNTQH---LSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSK 304
            .::|..|...|..|.:|:   ..|.|.....:...::.|||:||:||.|||.||::.||::||.:
 Worm   191 CLIILTGLGLLFFGESQYKDSFENIFENTSQDFTKVSLAFYSGLFAYSGWNFLNFIVEELQNPKR 255

  Fly   305 NLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFG 369
            |||.:|.|.|...|:.|.|.|::...|:||.||:||.||||.|.|::.|..|::|||.|..||.|
 Worm   256 NLPLAIAISITSCTVIYVLTNVALYTAISPDEMLESPAVAVLFANKLYGKFAFIMPLCVACSTIG 320

  Fly   370 SANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHG-TIDSLIDFFS 433
            ||||.:|.:.||.::.:|||.:..:|:.::.:..||.|.:|....::.|.:|.. .:..||::..
 Worm   321 SANGVIFTSARLFYSGAREGQMPAVLTMINKKTKTPIPAVILTGALSIAYLLASKDVYQLINYIQ 385

  Fly   434 FTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFI 498
            .:.|:..|.|:.||..:|.|.|:..||.|||:|.|.:.|...:.||..|:...|| :....||.:
 Worm   386 ISYWLAIGTAIAALFWLRRTMPDASRPIKVPLIWPAIFLAGCIALVLIPMVAAPR-DTGIGLLIM 449

  Fly   499 FAGLIFYVPFVKLGMTPRFMNKV----TLFFQLLLEVV 532
            .:.:..|..|:.....|::.|:.    |:|.|.|..||
 Worm   450 LSAVPVYGIFIGWKNKPKWFNEFIDSSTVFIQKLFMVV 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 184/486 (38%)
aat-1NP_501707.1 2A0308 2..491 CDD:273332 190/493 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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