DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and aat-4

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001023382.1 Gene:aat-4 / 177388 WormBaseID:WBGene00000005 Length:526 Species:Caenorhabditis elegans


Alignment Length:449 Identity:140/449 - (31%)
Similarity:250/449 - (55%) Gaps:21/449 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSS 147
            ::||:|.::.::..:||:|||::|..:|..|.|.|::.::|:.||::||:|.:.|.||||.....
 Worm    19 QMGLWSCMSYVIANIIGAGIFITPGPILQYTFSNGLALLVWIGCGLISLIGGICYIELGTSIHDP 83

  Fly   148 GAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVE--AFVTECDPP-RGVV-KMV 208
            |.::||.:.......||.|.||..::..|:..|:..|:|.||.|.  |.:...:.| .|:: |.:
 Worm    84 GCDFAYTVYVGWEGIAFSFMWVGVIMSFPASAAVQALTFGQYIVAGMAPIWPLEHPWDGIIEKGL 148

  Fly   209 ALVAIVMILFVNCYSVN-LGMAVQNVFTAAKLVAVVVVICGGAWKLM-QGNTQHLSNAFNGPMPN 271
            ....|:::..:|.|::: .....|.|.|.||::::.::|..|.:.|: :|.|::|.:.|.|...|
 Worm   149 GFALIIVLTILNLYAIDKYASKFQIVVTIAKMLSLAIIIVTGFYYLIFKGQTEYLEHPFEGSNTN 213

  Fly   272 VGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQE 336
            .|.|:.|||..||::.||:.||:.|.||:||.:.:|.:::.|:.:||..|..:||||:..::|.:
 Worm   214 PGQISLAFYGALWSFAGWDILNFGTPEIRNPRRTMPIALLGGVSIVTAVYLAMNISYMTVLTPGQ 278

  Fly   337 MIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVR 401
            ::.|.|||..|....||..::.:|..:.:...|:.|..:|...|...||:|||||...||.::..
 Worm   279 IMNSTAVAADFAQITLGGFSYAIPFMIALLLIGTLNSNIFCGSRFTHAAAREGHLPTFLSCINEE 343

  Fly   402 RLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGG---AMLALIVMRYTK-PNYPRPYK 462
            ..:|...|:| .|:.:.:|.....:|||::.||   :.:|.   .|.||:.:||.. |.:|...:
 Worm   344 SNSPRAALLF-QLVCTVVVTFIDTNSLINYVSF---VMFGQRVFTMTALMWIRYRNIPVHPDAIR 404

  Fly   463 VPIIIPVVVLVISVYLVAAPIFETPRVEYLYALL---FIFAGLIFYVPFVKLGMTPRFM 518
            ||:|...:..:|::.||..|..|    |:...::   .:..|:..|:.|:|....|.|:
 Worm   405 VPLIFSFLFWLITIALVVVPFIE----EFTQTIVGVGLVLMGVFLYIIFMKPMKLPEFL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 140/449 (31%)
aat-4NP_001023382.1 2A0308 1..474 CDD:273332 140/449 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165400
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.790

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