DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and B0454.6

DIOPT Version :10

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_494428.1 Gene:B0454.6 / 173650 WormBaseID:WBGene00015197 Length:585 Species:Caenorhabditis elegans


Alignment Length:502 Identity:115/502 - (22%)
Similarity:200/502 - (39%) Gaps:84/502 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 HLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLA-CGVLSLLGALAYAELGT 142
            :|.|.|||.....|.:|.|:|:||:|. :|.:|| ...|.|.|...| .|:.:||.|.:|||.|.
 Worm    24 NLRRCLGLMDITFLALGQMMGAGIYVL-TGTVVR-NQAGPSIIFSFALAGIAALLSAFSYAEFGA 86

  Fly   143 MNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQY---AVEAFVT-------- 196
            ....:|:.:.|....:|...||:..|...|...... |.:..|::.|   .::.::.        
 Worm    87 RFPRAGSAYTYTYIGFGELWAFIVGWTIPLEYMIGN-AAVARSWSAYFDNMLDNYIKNTTIGALG 150

  Fly   197 ECDPPRGVVK----MVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVVVICGGA------- 250
            |...|.|...    :::.:.|.:...|......:...|.:.|....:|.:.:||..|.       
 Worm   151 ELSEPGGFFSTYPDILSFLLICLCACVIAVGPKVSANVNSSFVVLNIVVIFIVIVSGICYADFNN 215

  Fly   251 WKLMQGNTQHLSNAFNGPMPNVGAI---ATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIII 312
            |   .|.|....:.| .|....|.:   ||.|:    :|.|:..|....||:|:|.:.:|.:..:
 Worm   216 W---TGTTSDGRSMF-FPFGLTGTLTGAATCFF----SYIGFEVLATAGEEVKSPHRTIPVATFL 272

  Fly   313 GIPLVTLCYALINISYLAAMSPQEMIESEA-VAVTFGNRILGALAWLMPLSVTISTFGSANGTLF 376
            .|.::...|.|:: |.|..|.|.:.:.:.| .|..|..|....:.:::.:...|....:....:|
 Worm   273 SIGVIMTLYILVS-STLTLMVPYDQVHTTAPFAEAFSARGCTTVMYIISIGALIGLTNNLVTGVF 336

  Fly   377 AAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYG 441
            |..|..:|.:.:|.:...|::|......|...::..:|:.:.:.|...|::|::|.|......|.
 Worm   337 ALPRAVYAMADDGLIFKWLAHVTSSTKVPLNAIVIFTLLNAIIALIFDIEALVEFLSIGTLFAYS 401

  Fly   442 GAMLALIVMRYTKP----------------------NY--PRPYKVPIIIPVVVLVISVYLVAAP 482
            ....:::|:||...                      |:  ..|....|.:.|..|:.|.:.:|. 
 Worm   402 FVSGSVLVLRYQSAPIDGDGKRMDNGGELSSWIPARNFWESLPAGTSISLGVAALIGSFFWLAF- 465

  Fly   483 IFETPRVEYLYALLFI-FAGLI-------------------FYVPFV 509
            .|.|...|:.|..:.| |.||:                   |.||||
 Worm   466 TFRTGFYEHWYGQISIGFNGLLIVLVMAFILGHQQNSLETSFKVPFV 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 115/502 (23%)
B0454.6NP_494428.1 2A0303 7..559 CDD:273330 115/502 (23%)

Return to query results.
Submit another query.