DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and aat-5

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_491002.2 Gene:aat-5 / 171814 WormBaseID:WBGene00000006 Length:537 Species:Caenorhabditis elegans


Alignment Length:471 Identity:149/471 - (31%)
Similarity:254/471 - (53%) Gaps:30/471 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 RLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSS 147
            ::|.....:.::|.:||||||::|:.:|....|:|:|.:||:.|.|:::|||:.|.||||....:
 Worm     6 KMGFLGATSYVIGNIIGSGIFITPASILRNVDSIGLSLLIWVLCAVIAILGAICYIELGTSIREA 70

  Fly   148 GAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVE----------AFVTECDPPR 202
            |.::||.......:.||.|.|||.|:..|:.:||...:|.||.:|          |.|..|.   
 Worm    71 GCDFAYICYVKWYSIAFAFMWVSVLMTYPATIAICAETFGQYLIEGLKQYYEIDDALVPTCQ--- 132

  Fly   203 GVVKMVALVAIVMILFVNCYSVN-LGMAVQNVFTAAKLVAVVVVI-CGGAWKLMQGNTQHLSNAF 265
               |:.|...:.::.::|.:.:: .....|.:.|.|||.:.:::| .|..:..::|...:|.|..
 Worm   133 ---KLFAYSLLFLVTWMNFFELSKFAARFQILATIAKLFSCMLIIGTGFYFYFVKGWHGYLENPM 194

  Fly   266 NGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLA 330
            .|.....|.:...||.||||:.||:.|||.|.|||:|.:|:|.:::.||.:||..|..||::|..
 Worm   195 QGSKYGTGNLILGFYGGLWAFSGWDVLNYSTGEIKHPKRNVPFALLTGISVVTAIYVAINVAYFV 259

  Fly   331 AMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDIL 395
            .:..:.:.:|:|||..|....||..|.::|..:.|...||.|..||:..|..:||:|:|||....
 Worm   260 VLDVETVKQSDAVAAIFSRETLGDFANVVPFLIGILLIGSLNSNLFSGSRYMYAAARQGHLPACF 324

  Fly   396 SYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAW---IFYGGAMLALIVMRYTK-PN 456
            |.|:....:|...::..|::|..:...|.:|:||.:..|..|   ||   :::||:::|:.. |.
 Worm   325 SCVNTETESPRVAVLAQSVLALVISYIGDLDTLITYVMFGFWAQRIF---SLVALLIIRHNHIPV 386

  Fly   457 YPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFM--- 518
            :|...:||:....:.|.|:|.||..|||...:...|...:.:|..:::|| |:...:.||::   
 Worm   387 HPDAVRVPLFCIYLFLAITVALVIIPIFYEFQSTALAIAICLFGFVLYYV-FIHKAIFPRWLVAL 450

  Fly   519 -NKVTLFFQLLLEVVP 533
             .||||:..:|.:.:|
 Worm   451 NKKVTLWCCILFDCLP 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 148/468 (32%)
aat-5NP_491002.2 2A0308 6..462 CDD:273332 147/465 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1752
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.880

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