DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and Slc7a3

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001288769.1 Gene:Slc7a3 / 11989 MGIID:1100521 Length:618 Species:Mus musculus


Alignment Length:526 Identity:120/526 - (22%)
Similarity:212/526 - (40%) Gaps:77/526 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RKPLERN-GSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTGSVGVSFII-WLAC 126
            |:.||.. |.|:     |.|.|.....|||.||:.:|:|::|....  |.....|.|.:| :|..
Mouse    16 RRVLELGMGETR-----LARCLSTLDLVALGVGSTLGAGVYVLAGE--VAKDKAGPSIVICFLVA 73

  Fly   127 GVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW--VSTLVLKPSQMAIICLSFAQY 189
            .:.|:|..|.|||.|.....||:.:.|.....|...||...|  :.:.|:..:.:|....|....
Mouse    74 ALSSVLAGLCYAEFGARVPGSGSAYLYSYVTVGELWAFTTGWNLILSYVIGTASVARAWSSAFDN 138

  Fly   190 AVEAFVTECDPPRGVVKM----------VALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAVVV 244
            .:...::.......::||          .||..::::..:.....:....|..|||...|:.:..
Mouse   139 LIGNHISRTLKGTILLKMPHVLAEYPDFFALALVLLLTGLLVLGASKSALVTKVFTGMNLLVLSF 203

  Fly   245 VICGG-------AWKLMQGN---TQHLSN--------AFNGPMP-----NVGAIATAFYTGLWAY 286
            ||..|       .|||.:.:   |...||        ...|.||     .:...||.||    |:
Mouse   204 VIISGFIKGELRNWKLTKEDYCLTMSESNGTCSLDSMGSGGFMPFGLEGILRGAATCFY----AF 264

  Fly   287 DGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEA-VAVTFG-- 348
            .|::.:....||.:||.:::|..|:|.:.:..|.|..:: |.|..|.|...:..|: :...|.  
Mouse   265 VGFDCIATTGEEAQNPQRSIPMGIVISMFICFLAYFGVS-SALTLMMPYYKLHPESPLPEAFSYV 328

  Fly   349 ----NRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGL 409
                .|.|.|:..|..||.::.      |::|...|:.::.:.:|.|..:|:.||.....|....
Mouse   329 GWEPARYLVAIGSLCALSTSLL------GSMFPMPRVMYSMAEDGLLFRVLAKVHSVTHIPIVAT 387

  Fly   410 IFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVL-- 472
            :...:||:.|.....:..|:|..|....:.:....:.::::||......:..:..:.:....|  
Mouse   388 LVSGVIAAFMAFLFELTDLVDLMSIGTLLAHSLVSICVLILRYQPDQEMKSVEEEMELQEETLEA 452

  Fly   473 -VISVYLVAAPIFETP-----RVEY----LYALLFIFAGLI--FYVPFVKLGMTPRFMNKVTLFF 525
             .::|..:..|:...|     ||.|    |.|:|.....|:  ::...::.| .|.::..|.|..
Mouse   453 EKLTVQALFCPVNSIPTLLSGRVVYVCSSLLAVLLTVLCLVLTWWTTPLRSG-DPVWVTVVVLIL 516

  Fly   526 QLLLEV 531
            .|:|.:
Mouse   517 GLILAI 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 120/526 (23%)
Slc7a3NP_001288769.1 2A0303 4..588 CDD:273330 120/526 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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