DRSC/TRiP Functional Genomics Resources

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Protein Alignment sbm and LOC100495877

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_002941805.1 Gene:LOC100495877 / 100495877 -ID:- Length:489 Species:Xenopus tropicalis


Alignment Length:496 Identity:201/496 - (40%)
Similarity:305/496 - (61%) Gaps:21/496 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 EAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRTG- 114
            ||| ||.          |:...|.|....|:|.||:|..:..:||:::|:||||||:|:|.... 
 Frog     5 EAP-TDH----------EQIDHTANKNFSLKRNLGIFDCICFVVGSIVGAGIFVSPTGVLQYAQL 58

  Fly   115 SVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPSQM 179
            :|||:..||.|.|.:|::|||.|||||:....:|.|:.:.....|..|||::.|...|.:.|:..
 Frog    59 NVGVALCIWAAGGAISMMGALCYAELGSALPYAGGEYYHVKRGLGHLPAFIYIWTLILFILPASN 123

  Fly   180 AIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVA-VV 243
            |...|:||:||...|.:.|..|..:.|:|||..:.::..:|..|......||||||..|::| ::
 Frog   124 AARALTFAEYATRPFYSGCPTPELLKKIVALAVLWILGIINTKSTKATTWVQNVFTVLKMLALIL 188

  Fly   244 VVICGGAWKLMQGNTQ---HLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSKN 305
            :||||  :|.:....:   ||.|||:.|.||...||.:|:..|:||.|||.|||:.|:|||||||
 Frog   189 IVICG--FKELARKMEIPGHLQNAFSSPDPNAAQIAESFFQSLYAYGGWNALNYIAEDIKNPSKN 251

  Fly   306 LPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFGS 370
            :|...|..:..||..|.|:|||||..::|:|::.|.||:||:..|::..:||::|:||.||.|||
 Frog   252 IPLCTITAVSAVTAFYLLVNISYLTVLTPKEIVSSAAVSVTWAVRVIPTVAWIIPVSVAISIFGS 316

  Fly   371 ANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFT 435
            .||.:|..|||.:|.|:||||..::|.:||..||.||..:..::|||..|:...:.||.::|.|:
 Frog   317 LNGDVFMLGRLNYAGSKEGHLPSLISMLHVNHLTLAPATVLSTIIASVFVIPSELISLTNYFGFS 381

  Fly   436 AWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIFA 500
            :.:..|..:.:|||:||.:||..|||||.:.:...|:::..:|..|||.::|:|:|.|||||:.:
 Frog   382 SSLLGGLTVTSLIVLRYREPNLHRPYKVFLPVAFGVVLVYTFLFLAPIIQSPKVQYFYALLFMLS 446

  Fly   501 GLIFYVPFVKLGMTPRFMNKVTLFFQLLLEVVPTSSMAMFE 541
            .::.|.|||...:...:.:.:|...|||:||.||:   :||
 Frog   447 SMLIYFPFVHFKLRIPYFDAITCHLQLLMEVAPTN---IFE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 194/483 (40%)
LOC100495877XP_002941805.1 2A0308 23..477 CDD:273332 187/455 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385385at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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