DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a13

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_002941804.3 Gene:slc7a13 / 100495712 XenbaseID:XB-GENE-995917 Length:489 Species:Xenopus tropicalis


Alignment Length:497 Identity:211/497 - (42%)
Similarity:313/497 - (62%) Gaps:19/497 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 PEAPET-DSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT 113
            ||...| |...|.|:          .|..|.|.|.||.|.|...:||.::|:||||||:|:|...
 Frog     2 PEMETTADHENTLRI----------ANKSVSLRRTLGFFDGTCFLVGIIVGAGIFVSPTGVLQYA 56

  Fly   114 G-SVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVSTLVLKPS 177
            . :|||:..||.|||:|.::|||.|||||:....:|.|:.:...|.||.|||:|.|...|.::|:
 Frog    57 QLNVGVALCIWAACGILVMMGALCYAELGSALPYAGGEYYHVKQALGPFPAFIFIWTLILFIRPA 121

  Fly   178 QMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTAAKLVAV 242
            ..|...|.||:||...|.:.|..|..:.|:|||..:.::..:|..|......||||||..|::|:
 Frog   122 SNAARALMFAEYATRPFFSGCPTPELLKKIVALAVLWVLGIINTKSAKTTTWVQNVFTVLKMLAL 186

  Fly   243 VVVICGGAWKLMQGNTQ---HLSNAFNGPMPNVGAIATAFYTGLWAYDGWNNLNYVTEEIKNPSK 304
            ::::..|..:|.: .|:   ||.|||:.|..|...||.:|:.||:||.|||.|||:.||||||:|
 Frog   187 ILIVTCGLKELAE-KTEIPGHLQNAFSSPDLNAAQIAESFFQGLYAYGGWNYLNYIAEEIKNPTK 250

  Fly   305 NLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLSVTISTFG 369
            |:|...|..:.:|.:.|.|:|||||..::|:|::.|.||:||:.:|::..:||::|:||.||.||
 Frog   251 NIPLCTITAVSVVIVFYLLVNISYLTVLTPKEIVSSAAVSVTWADRVIPMVAWIIPVSVAISIFG 315

  Fly   370 SANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSF 434
            :.||.:|..|||.:|.|:||||..:||.:||..|||||.:|..::|||..|:...:.||.::|.|
 Frog   316 ALNGGMFMLGRLNYAGSKEGHLPSLLSMLHVNHLTPAPAMILSTIIASIFVIPSDLLSLTNYFGF 380

  Fly   435 TAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYLYALLFIF 499
            :.|:..|..:::|||:||.:||.||||||.:.|...|::::.:||.|||.::|:|:|.|||||:.
 Frog   381 STWLLVGLTVISLIVLRYREPNLPRPYKVFLPIAFGVVLVAAFLVLAPIIQSPKVQYFYALLFML 445

  Fly   500 AGLIFYVPFVKLGMTPRFMNKVTLFFQLLLEVVPTSSMAMFE 541
            :.:|.|.|||...:...:.|.:|.:.|||:||.||.   :||
 Frog   446 SSMIIYFPFVYFKLRVPYFNAITCYLQLLMEVAPTD---IFE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 204/483 (42%)
slc7a13XP_002941804.3 2A0308 17..477 CDD:273332 199/460 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D385385at33208
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11785
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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