DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a5

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001135465.1 Gene:slc7a5 / 100101781 XenbaseID:XB-GENE-480035 Length:507 Species:Xenopus tropicalis


Alignment Length:518 Identity:212/518 - (40%)
Similarity:302/518 - (58%) Gaps:24/518 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RGHNVPTKTTSNGTMCANGSLGTEGPEAPETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSG 89
            |..:.||||.......:...|...|...| |||:|                ..|.|:|.:.|.:|
 Frog     8 RRQSGPTKTEEEDRQASEKMLHQNGSAEP-TDSAG----------------GAVELQRTITLVNG 55

  Fly    90 VALIVGTMIGSGIFVSPSGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYF 154
            ||:||||:|||||||:|:|:|...||.|:|.::|..||:.|::|||.||||||..:.||.::||.
 Frog    56 VAIIVGTIIGSGIFVTPTGVLREAGSPGLSLLVWAVCGLFSIVGALCYAELGTTISKSGGDYAYV 120

  Fly   155 MDAYGPAPAFLFSWVSTLVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFV 219
            ::.|||.||||..||..|:::||...|:.|.||.|.::.....|..|....|:||.:.|:::..:
 Frog   121 LEVYGPLPAFLKLWVELLIIRPSSQYIVALVFATYLLKPVFPTCPVPDDAAKLVACLCILLLTAI 185

  Fly   220 NCYSVNLGMAVQNVFTAAKLVAVVVVICGGAWKLMQGNTQHL--SNAFNGPMPNVGAIATAFYTG 282
            |||||.....||:.|.||||:|:.::|..|..:|.:|..::|  .|||.|...|||....|.|:|
 Frog   186 NCYSVKAATRVQDAFAAAKLLALCLIIILGFVQLGKGGVENLKPENAFEGTSTNVGQWVLALYSG 250

  Fly   283 LWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTF 347
            |:||.|||.||:|.||:..|.|||||:|||.:|:|||.|.|.|::|...:|.::|:.||||||.|
 Frog   251 LFAYGGWNYLNFVVEEMIEPYKNLPRAIIISMPIVTLVYVLTNLAYFTTLSTEQMLNSEAVAVDF 315

  Fly   348 GNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFH 412
            ||..||.:||::|:.|.:|.|||.||:||.:.||.|..:|||||..:|:.:|.|.|||.|.|||.
 Frog   316 GNYHLGVMAWIIPVFVGLSCFGSVNGSLFTSSRLFFVGAREGHLPSLLAMIHPRLLTPMPSLIFT 380

  Fly   413 SLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVY 477
            ..:.........|.|:|:||||..|:....|::.|:.:||.||...||.||.|::|:..::...:
 Frog   381 CAMTLLYAFSDDIFSVINFFSFFNWLCVALAIIGLMWLRYKKPELERPIKVNILLPIFFILACFF 445

  Fly   478 LVAAPIFETPRVEYLYALLFIFAGLIFYVPFVKLGMTPRFM----NKVTLFFQLLLEVVPTSS 536
            |:....:.|| ||.....:.|.:|:..|...|.....|.::    ...|...|.::|.||..|
 Frog   446 LIVVSFYMTP-VECGIGFIIILSGVPVYFFGVWWQNKPEWLLHGIYSSTALLQKVMEAVPQES 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 202/484 (42%)
slc7a5NP_001135465.1 2A0308 1..506 CDD:273332 211/515 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.040

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