DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and zgc:175280

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001107956.1 Gene:zgc:175280 / 100007793 ZFINID:ZDB-GENE-080219-39 Length:613 Species:Danio rerio


Alignment Length:577 Identity:135/577 - (23%)
Similarity:219/577 - (37%) Gaps:152/577 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 RKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSPSGLLVRT---GSVGVSFIIWLA 125
            |||||.:|...|    .:|.|.....|||.||:.:|:|::|. ||.:.||   .|:.|||.|   
Zfish    16 RKPLEPDGEESN----FKRCLSTLDLVALGVGSTLGAGVYVL-SGEVARTVSGPSIIVSFFI--- 72

  Fly   126 CGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSW--VSTLVLKPSQMA-------- 180
            ..|.|:...|.|||.|.....:|:.:.|.....|...||:..|  :.:.|:..|.:|        
Zfish    73 AAVASVFAGLCYAEFGARVPKTGSAYLYSYVTVGEVWAFITGWNLLLSYVIGTSSVARAWSGTFD 137

  Fly   181 -IICLSFAQYAVEAFVTECDPPRGVVKMVA-----LVAIVMILF-VNCYSVNLGMAVQNVFTAAK 238
             :|......:      ...:.|..:..:..     ..|::|:|. :..:.|.....|..:||...
Zfish   138 DLIGNKIGNF------FSANTPMNLPGLAPYPDFFAAALIMVLAGILAFGVKESAIVNKIFTGLN 196

  Fly   239 LVAVVVVICGGAWKLMQGNTQ---------------HLSN--------------AFNGPMPNVGA 274
            :|.:|.||..|..|...||.|               .:||              .|.|..  .||
Zfish   197 MVVLVFVIISGFIKGDIGNWQITPEEIFNYTITANLSISNETLSSFGQGGFFPFGFEGTF--AGA 259

  Fly   275 IATAFYTGLWAYDGWNNLNYVTEEIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIE 339
             ||.||    |:.|::.:....||::||.|::|..|:..:.:..|.|..::.: |..|.|...:.
Zfish   260 -ATCFY----AFVGFDCIATTGEEVRNPQKSIPIGIVASLLICFLAYFGVSAA-LTLMMPYYRLN 318

  Fly   340 SE-----------------AVAVTFGNRILGALAWLMPLSVTISTFGSANGTLFAAGRLCFAASR 387
            .:                 ||||       |:|.       .:||  |..|.:|...|:.||.:|
Zfish   319 LQSPLPVAFEYVGWEPAKYAVAV-------GSLC-------ALST--SLLGAMFPMPRVLFAMAR 367

  Fly   388 EGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDSLIDFFSFTAWIFYGGAMLALIVMRY 452
            :|.|...||.:..|: :|....|...::|:.|.:...:.:|:|..|......|....:.::::||
Zfish   368 DGLLFSPLSKMSSRQ-SPVIATIASGVVAAIMAMVFDLKALVDMMSIGTLFAYTLVAICILILRY 431

  Fly   453 --------------TKPNYP-RP-----YKVPIIIPVVVLVISVYLVAAPIFETPRVE------- 490
                          ||...| ||     .|....:.::.|:..|:.:...:..|..||       
Zfish   432 QEEPAVISEKADVQTKKWNPFRPPNTATAKSSKAVSLLTLLTIVFSIILSVIITKGVEAGLIAEW 496

  Fly   491 ------------YLYALLFIF------AGLIFYVPFVKLGMTPRFMNKVTLFFQLLL 529
                        :|..::.|:      ....|.||.  |.:.|.|...:.::..|.|
Zfish   497 WMILIITVVAVGFLLTIIIIWRQPQNRTKAAFMVPL--LPLLPIFSTFINVYLMLQL 551

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 135/577 (23%)
zgc:175280NP_001107956.1 2A0303 5..578 CDD:273330 135/577 (23%)
DUF4191 459..>528 CDD:290541 8/68 (12%)
AA_permease_C 528..578 CDD:290617 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.