DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sbm and slc7a8a

DIOPT Version :9

Sequence 1:NP_727785.1 Gene:sbm / 32397 FlyBaseID:FBgn0030574 Length:541 Species:Drosophila melanogaster
Sequence 2:NP_001258826.1 Gene:slc7a8a / 100007704 ZFINID:ZDB-GENE-121120-2 Length:531 Species:Danio rerio


Alignment Length:499 Identity:198/499 - (39%)
Similarity:299/499 - (59%) Gaps:20/499 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TEGPE-----APETDSSGTGRMRKPLERNGSTQNHVVHLERRLGLFSGVALIVGTMIGSGIFVSP 106
            |:||.     ||.|.|...|     ....|:|....|.|::.:||.|...:|||.:|||||||||
Zfish     2 TDGPRQRGSAAPSTASEDGG-----AADTGNTAGQSVALKKEIGLVSACGIIVGNIIGSGIFVSP 61

  Fly   107 SGLLVRTGSVGVSFIIWLACGVLSLLGALAYAELGTMNTSSGAEWAYFMDAYGPAPAFLFSWVST 171
            .|:|....|||::.|:|:..|:::.:|||.|||||.....||.:::|..|.:|....||..|::.
Zfish    62 KGVLENASSVGLALIVWILTGIITAIGALCYAELGVTIPKSGGDYSYVKDIFGGLAGFLRLWIAV 126

  Fly   172 LVLKPSQMAIICLSFAQYAVEAFVTECDPPRGVVKMVALVAIVMILFVNCYSVNLGMAVQNVFTA 236
            ||:.|:..|:|.|:|:.|.::.....|.||...::::|.:.::::.:|||.||.....||:||||
Zfish   127 LVIYPTNQAVIALTFSNYVLQPLFPTCFPPENGLRILAAICLLLLTWVNCSSVRWATRVQDVFTA 191

  Fly   237 AKLVAVVVVICGGAWKLMQGNTQHL--SNAFNGPMP--NVGAIATAFYTGLWAYDGWNNLNYVTE 297
            .||:|::::|..|..::.:|....|  :|||. |..  :||.||.||..|.:||.|||.||||||
Zfish   192 GKLLALILIIIMGIVQICKGEYYWLEPANAFE-PFQDYDVGLIALAFLQGSFAYGGWNFLNYVTE 255

  Fly   298 EIKNPSKNLPRSIIIGIPLVTLCYALINISYLAAMSPQEMIESEAVAVTFGNRILGALAWLMPLS 362
            |:.:|..||||:|.|.|||||..|...||:|:.||||||::.|.|||||||.::||.::|:||:|
Zfish   256 ELVDPYVNLPRAIFISIPLVTFVYVFANIAYVTAMSPQELLASNAVAVTFGEKLLGVMSWIMPIS 320

  Fly   363 VTISTFGSANGTLFAAGRLCFAASREGHLLDILSYVHVRRLTPAPGLIFHSLIASAMVLHGTIDS 427
            |.:||||..||:||.:.||.||.:|||||..:|:.:||:|.||.|.|:|..:....|:....:.:
Zfish   321 VALSTFGGVNGSLFTSSRLFFAGAREGHLPSLLAMIHVKRCTPIPALLFTCISTLLMLCTSDMYT 385

  Fly   428 LIDFFSFTAWIFYGGAMLALIVMRYTKPNYPRPYKVPIIIPVVVLVISVYLVAAPIFETPRVEYL 492
            ||::..|..::|||..:...||:|..:|:..||.|:.::.||:.|:...:|:...::..|.|..:
Zfish   386 LINYVGFINYLFYGVTVAGQIVLRIKQPDMHRPIKISLVWPVIYLLFWAFLLIFSLYSEPVVCGI 450

  Fly   493 YALLFIFAGLIFYVPFVKLGMTPR----FMNKVTLFFQLLLEVV 532
             .|..:..|:..|...|.....|:    |::|:|...|....||
Zfish   451 -GLAIMLTGVPVYFLGVYWDNKPQCFNTFVDKMTYLGQKFCVVV 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sbmNP_727785.1 2A0308 53..532 CDD:273332 192/486 (40%)
slc7a8aNP_001258826.1 2A0308 1..497 CDD:273332 198/499 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1287
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53617
OrthoDB 1 1.010 - - D621852at2759
OrthoFinder 1 1.000 - - FOG0000064
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100314
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2200
SonicParanoid 1 1.000 - - X75
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.760

Return to query results.
Submit another query.