DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nmdyn-D6 and Nme6

DIOPT Version :10

Sequence 1:NP_572965.1 Gene:nmdyn-D6 / 32396 FlyBaseID:FBgn0030573 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001178813.1 Gene:Nme6 / 58964 RGDID:61896 Length:186 Species:Rattus norvegicus


Alignment Length:151 Identity:68/151 - (45%)
Similarity:94/151 - (62%) Gaps:6/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEITLALIKPHVLRNTYAMQQI-RALISQNFTILDQKEVCITKELSERFYAEHKGKFFYHRLTSF 64
            :::|||||||..:.:...::.: :.::|..|.|:..:|:....|...|||.||:|:|||.||..|
  Rat    11 LQLTLALIKPDAVAHPLILEAVHQQILSNKFLIVRMRELLWKPEDCRRFYREHEGRFFYQRLVEF 75

  Fly    65 MNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSDPNCIRALYGISDTRNACHGSDSEASALRE 129
            |.|||..|.||..:..||.||:|:|||:||||.:..|:.||...|::||||..|||||..||.||
  Rat    76 MTSGPIRAYILAHKDAIQLWRTLMGPTRVFRARHIAPDSIRGSLGLTDTRNTTHGSDSVVSASRE 140

  Fly   130 ISILFPEFDAAVGSRQAKREE 150
            |:..||:|     |.|...||
  Rat   141 IAAFFPDF-----SEQRWYEE 156

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nmdyn-D6NP_572965.1 NDPk6 2..135 CDD:239877 61/133 (46%)
Nme6NP_001178813.1 NDPk6 12..146 CDD:239877 61/133 (46%)

Return to query results.
Submit another query.