DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and lrit1a

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001018174.2 Gene:lrit1a / 553943 ZFINID:ZDB-GENE-040924-5 Length:643 Species:Danio rerio


Alignment Length:305 Identity:69/305 - (22%)
Similarity:105/305 - (34%) Gaps:91/305 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SDQRFEAMHSPHAEDWTLRIRYAQRKDSGIYECQISTTPPIGHSVYL---NIVEPVTDIIGGPEL 155
            ||........|.......|:|.|                 :|::|.|   .:..|:      |||
Zfish   242 SD
AELRRCQGPRVHTAVARVRSA-----------------VGNNVLLRCGTVGVPI------PEL 283

  Fly   156 HINR--GSTINLTCIVKFAPEPPPTVIWS-------HNRE---------------------IINF 190
            ...|  |..:|.|.:::.:.|   .::||       ..|:                     ||| 
Zfish   284 AWRRADGKPLNGTVLLENSKE---GIVWSILSVPAVSYRDTGKYICKATNYAGSAEAVISLIIN- 344

  Fly   191 DSPRGGISLVTEKGVLTTSR-LLVQKAITQDSGLYTC---TPSNANPTSVRVHIVDGEHPAAMHT 251
            |:|:.....:..|..|.:.: ..:.||..|:..:.|.   ||.|..|.|..|... |.:| .|.:
Zfish   345 DAPKMENPTLDPKPKLKSKKPNTMVKAAYQEKHIATYVSPTPKNGLPLSGTVSYT-GPYP-GMES 407

  Fly   252 GNNGNS-----TASQPPVLLPLVL--LTCSTLMLLQ----LVASCSTLVPATPPGC-----RTVQ 300
            .|..||     ||| |...|...|  |..:|..|.|    :|.|...:.......|     .|.:
Zfish   408 DNAANSRMNTQTAS-PDGFLETNLSNLAANTSSLQQDPDRVVRSVKVIGDTDYTVCLNWRAPTAK 471

  Fly   301 QASTFAEEKAM-GQRSNRNCQDLQELEESQDLRRRGVERSAVPGT 344
            ..:.|:...|: |:|      |::.:..|....|..:| ..||.|
Zfish   472 NTTAFSVLYAVFGER------DMRRINVSPGNNRIVIE-GLVPKT 509

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 6/36 (17%)
V-set 52..143 CDD:284989 9/51 (18%)
IG_like 153..238 CDD:214653 27/118 (23%)
ig 153..232 CDD:278476 25/112 (22%)
lrit1aNP_001018174.2 leucine-rich repeat 61..84 CDD:275378
LRR_8 63..119 CDD:290566
LRR_RI <77..175 CDD:238064
leucine-rich repeat 85..108 CDD:275378
LRR_8 108..167 CDD:290566
leucine-rich repeat 109..132 CDD:275378
leucine-rich repeat 133..156 CDD:275378
leucine-rich repeat 157..170 CDD:275378