DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and negr1

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_009300786.1 Gene:negr1 / 445374 ZFINID:ZDB-GENE-040822-27 Length:360 Species:Danio rerio


Alignment Length:294 Identity:66/294 - (22%)
Similarity:106/294 - (36%) Gaps:80/294 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTHWI--IFLGILCLLAGCTDGASKRFFTDFLQDLPTPGTGGPTFD-TTIGTNITGLVGKTVKL 62
            :|..|:  |.|.:.|.|..|               ||    .|.|.| ||...::....|.|..|
Zfish    12 VSGQWLTAIILSLCCFLPSC---------------LP----AGQTVDYTTSSESVVSRQGDTALL 57

  Fly    63 TCRVKNLGNRTVSWVRHRDIHLLTVGRYTYTSDQRFEAMHS-PHAEDWTLRIRYAQRKDSGIYEC 126
            .|.:.: |....:|:....|  :..|...::.|.|...:.: ....:::|:|:.....|.|:|.|
Zfish    58 RCYLLD-GISKGAWLNRSSI--IYAGNDKWSGDPRVSIVSNVGDKHEYSLQIQKVDVTDEGVYTC 119

  Fly   127 QISTTPPIGHSVYLNIVEPVT----DIIGGPELHINRGSTINLTCIVKFAPEPPPTVIWSH---- 183
            .|.:...: |...:.::..|.    ||  ..::.:|.||.::|.|.....||  |.:.|.|    
Zfish   120 SIQSERNL-HPKLIQLIVKVPPKIYDI--SSDITVNEGSNVSLICAASGKPE--PKISWRHISPS 179

  Fly   184 -----NREIINFDSPRGGISLVTEKGVLTTSRLLVQKAITQDSGLYTCTPSN--ANP--TSVRVH 239
                 :.|.:|..    |||                   ...:|.|.|...|  |:|  .:|||.
Zfish   180 ARKYESGEYLNIT----GIS-------------------RDQAGDYECGAENDIASPDTKTVRVT 221

  Fly   240 IVDGEHPAAMHTGNNGNSTASQPPVLLPLVLLTC 273
            :   ..|.|:|...:......|      :.||.|
Zfish   222 V---NFPPAIHEMKSHGVRPGQ------VALLRC 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 17/80 (21%)
V-set 52..143 CDD:284989 18/91 (20%)
IG_like 153..238 CDD:214653 22/97 (23%)
ig 153..232 CDD:278476 19/89 (21%)
negr1XP_009300786.1 Ig 42..121 CDD:299845 17/81 (21%)
IG_like 44..136 CDD:214653 18/95 (19%)
I-set 140..222 CDD:254352 26/108 (24%)
IGc2 153..208 CDD:197706 17/79 (22%)
IG_like 236..312 CDD:214653 4/17 (24%)
IGc2 238..304 CDD:197706 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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