DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and Dscam1

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001246162.1 Gene:Dscam1 / 35652 FlyBaseID:FBgn0033159 Length:2038 Species:Drosophila melanogaster


Alignment Length:241 Identity:49/241 - (20%)
Similarity:85/241 - (35%) Gaps:77/241 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 GGPTFDT--TIGTNITGLV---------GKTVKLTCRVKNLGNRTVSWVRHRDIHLLTVGRYTYT 93
            ||.:.:|  |:...::..:         |:....||:......:||||::...    .:|     
  Fly   333 GGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGK----AIG----- 388

  Fly    94 SDQRFEAMHSPHAEDWTLRIRYAQRKDSGIYECQIST-----------------TPPIGHSVYL- 140
                       |:|. .|||...:::|.|:|:|.:..                 .||:....:. 
  Fly   389 -----------HSEP-VLRIESVKKEDKGMYQCFVRNDQESAEASAELKLGGRFDPPVIRQAFQE 441

  Fly   141 NIVEPVTDIIGGPELHINRGSTINLTCIVKFAPEPPPTVIWS-HNREIINFDSPRGGISLVTEKG 204
            ..:||              |.::.|.|:.  ...|.|.:.|. ..::|.|.|..:.| ..||..|
  Fly   442 ETMEP--------------GPSVFLKCVA--GGNPTPEISWELDGKKIANNDRYQVG-QYVTVNG 489

  Fly   205 VLTTSRLLVQKAITQDSGLYTCTPSNANPTSVRVHIVDGEHPAAMH 250
            .: .|.|.:......|.|||.|...:      :|.:  .||.|.::
  Fly   490 DV-VSYLNITSVHANDGGLYKCIAKS------KVGV--AEHSAKLN 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 17/105 (16%)
V-set 52..143 CDD:284989 19/117 (16%)
IG_like 153..238 CDD:214653 20/85 (24%)
ig 153..232 CDD:278476 20/79 (25%)
Dscam1NP_001246162.1 Ig 38..130 CDD:299845
IG 57..133 CDD:214652
IG_like 267..343 CDD:214653 3/9 (33%)
Ig 269..340 CDD:143165 2/6 (33%)
IG_like 353..425 CDD:214653 17/92 (18%)
IGc2 361..413 CDD:197706 17/72 (24%)
I-set 433..527 CDD:254352 27/120 (23%)
IGc2 446..517 CDD:197706 21/94 (22%)
I-set 533..618 CDD:254352
IGc2 544..607 CDD:197706
Ig 641..714 CDD:143165
IGc2 735..804 CDD:197706
I-set 819..914 CDD:254352
Ig 833..921 CDD:299845
FN3 918..1011 CDD:238020
FN3 1018..1116 CDD:238020
FN3 1124..1217 CDD:238020
FN3 1222..1312 CDD:238020
Ig 1339..1406 CDD:299845
FN3 1409..1499 CDD:238020
FN3 1504..1584 CDD:238020
Dscam_C 1890..2008 CDD:289151
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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