DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and Dscaml1

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_001101611.1 Gene:Dscaml1 / 315615 RGDID:1304887 Length:2111 Species:Rattus norvegicus


Alignment Length:249 Identity:61/249 - (24%)
Similarity:95/249 - (38%) Gaps:47/249 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TGLVGKTVKLTCRVKNLGNRTVSWVRHRDIHLLTVGRYTYTSDQRFEAMHSPHAEDWTLRIRYAQ 117
            || :|.||.|:|.:......|:.|  :|:..|:..|          ||:......:.||.|..||
  Rat   384 TG-IGSTVILSCALTGSPEFTIRW--YRNTELVLPG----------EAISIRGLSNETLLISSAQ 435

  Fly   118 RKDSGIYECQISTTPPIGHSVYLNIVEPVTD--IIGGPELHINRGSTINLTCIVKFAPEPPPTVI 180
            :..||.|:|..:..........:.::|..|.  :....|..:|.|...:|.|..|.|  |||||.
  Rat   436 KSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVNPGEQFSLMCAAKGA--PPPTVT 498

  Fly   181 WSHNREIINFDSPRGGISLVTEKGVLTTSRLLVQKAITQDSGLYTCTPSNANPTSVRVHIVDGEH 245
            |:.:.|.:..|............|. |.|.:.|.....:|.|:|.||..|:        :...|:
  Rat   499 WALDDEPVVRDGSHRTNQYTMSDGT-TISHMNVTGPQIRDGGVYRCTARNS--------VGSAEY 554

  Fly   246 PAAMHTGNNGNSTASQPPVLLPLVLLTCSTLMLLQLVASCSTLVPATPPGCRTV 299
            .|.::...        ||.:..:..:|.        ||...||:     .||.:
  Rat   555 QARINVRG--------PPSIRAMRNITA--------VAGRDTLI-----NCRVI 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 23/77 (30%)
V-set 52..143 CDD:284989 23/89 (26%)
IG_like 153..238 CDD:214653 25/84 (30%)
ig 153..232 CDD:278476 25/78 (32%)
Dscaml1NP_001101611.1 IG 101..173 CDD:214652
IGc2 101..168 CDD:197706
Ig 183..276 CDD:299845
IG_like 195..276 CDD:214653
I-set 291..369 CDD:254352
IGc2 298..359 CDD:197706
IGc2 386..447 CDD:197706 21/72 (29%)
I-set 466..560 CDD:254352 27/104 (26%)
Ig 466..556 CDD:299845 26/100 (26%)
IGc2 577..635 CDD:197706 4/16 (25%)
IG_like 665..744 CDD:214653
Ig 673..739 CDD:143165
I-set 748..843 CDD:254352
Ig7_DSCAM 765..843 CDD:143211
I-set 849..942 CDD:254352
Ig 861..949 CDD:299845
FN3 945..1039 CDD:238020
FN3 1046..1143 CDD:238020
fn3 1151..1237 CDD:278470
FN3 1249..1340 CDD:238020
IGc2 1364..1428 CDD:197706
FN3 1442..1532 CDD:238020
FN3 1546..1618 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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