DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and Ncam2

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:NP_981954.2 Gene:Ncam2 / 288280 RGDID:1303131 Length:837 Species:Rattus norvegicus


Alignment Length:239 Identity:58/239 - (24%)
Similarity:86/239 - (35%) Gaps:69/239 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GKTVKLTCRVKNLGNRTVSWVRHRDIHLLTVGRYTYTSDQRFEAMHSPHAEDWTLRIRYAQRKDS 121
            |:..::.|||.:.....|||:.|.:       ..|...|.||..:.:.:     |:|....:.|.
  Rat   129 GEDAEVVCRVSSSPAPAVSWLYHNE-------EVTTIPDNRFAVLANNN-----LQILNINKSDE 181

  Fly   122 GIYECQ----------------ISTTPPIGHSVYLNIVEPVTDIIGGPELHINRGSTINLTCIVK 170
            |||.|:                |...||.       ||.|........|    ||..:.|||  |
  Rat   182 GIYRCEGR
VEARGEIDFRDIIVIVNVPPA-------IVMPQKSFNATAE----RGEEMTLTC--K 233

  Fly   171 FAPEPPPTVIWSHNREIINFDSPRGGISLVTEKGVL--TTSRLLVQKAITQDSGLYTCTPSNAN- 232
            .:..|.|.:.|..|.::|.          ..||.:|  :.:.|.|:..|.:|.|.|.|..:|.. 
  Rat   234 ASGSPDPAISWFRNGKLIE----------ENEKYILKGSNTELTVRNIINKDGGSYVCKATNKAG 288

  Fly   233 --------PTSVRVHIVDGEHPAAMHTGNNGNST----ASQPPV 264
                    ...|:.||:..::..   |..||:.|    |...||
  Rat   289 EDQKQAFLQVFVQPHILQLKNET---TSENGHVTLICEAEGEPV 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 20/89 (22%)
V-set 52..143 CDD:284989 22/101 (22%)
IG_like 153..238 CDD:214653 24/95 (25%)
ig 153..232 CDD:278476 23/80 (29%)
Ncam2NP_981954.2 IgI_1_NCAM-2 21..113 CDD:409452
Ig strand B 38..42 CDD:409452
Ig strand C 50..54 CDD:409452
Ig strand E 76..80 CDD:409452
Ig strand F 90..95 CDD:409452
Ig strand G 104..107 CDD:409452
IGc2 128..189 CDD:197706 19/71 (27%)
Ig strand B 130..139 CDD:409353 2/8 (25%)
Ig strand C 145..153 CDD:409353 4/7 (57%)
Ig strand C' 156..159 CDD:409353 1/2 (50%)
Ig strand D 162..167 CDD:409353 2/4 (50%)
Ig strand E 168..175 CDD:409353 2/11 (18%)
IgI_1_MuSK 209..298 CDD:409562 27/111 (24%)
Ig strand B 228..232 CDD:409562 1/3 (33%)
Ig strand C 241..245 CDD:409562 0/3 (0%)
Ig strand E 264..268 CDD:409562 1/3 (33%)
Ig strand F 278..283 CDD:409562 2/4 (50%)
Ig strand G 291..294 CDD:409562 0/2 (0%)
Ig 300..397 CDD:416386 10/33 (30%)
Ig strand A 300..305 CDD:409353 2/4 (50%)
Ig strand A' 309..313 CDD:409353 0/6 (0%)
Ig strand B 317..325 CDD:409353 1/7 (14%)
Ig strand C 331..337 CDD:409353
Ig strand C' 340..343 CDD:409353
Ig strand D 353..359 CDD:409353
Ig strand E 362..368 CDD:409353
Ig strand F 376..384 CDD:409353
Ig strand G 387..397 CDD:409353
Ig_3 401..479 CDD:404760
Ig strand B 418..422 CDD:409353
Ig strand C 431..435 CDD:409353
Ig strand E 458..462 CDD:409353
Ig strand F 472..477 CDD:409353
Ig strand G 486..489 CDD:409353
FN3 496..588 CDD:238020
fn3 594..678 CDD:394996
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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