DRSC/TRiP Functional Genomics Resources

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Protein Alignment dpr8 and lrit3b

DIOPT Version :9

Sequence 1:NP_001285239.1 Gene:dpr8 / 32387 FlyBaseID:FBgn0052600 Length:344 Species:Drosophila melanogaster
Sequence 2:XP_009305418.1 Gene:lrit3b / 100144406 ZFINID:ZDB-GENE-070424-130 Length:487 Species:Danio rerio


Alignment Length:330 Identity:68/330 - (20%)
Similarity:104/330 - (31%) Gaps:113/330 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 RVKNLG---NRTVSWVRHRDIHLLTVGRY----TY--TSDQRFEAMHSPHAEDWTLR-IRYAQRK 119
            |::.||   ||...      |.||.| ||    ||  .|..|...:.:.....|... ....||.
Zfish   161 RLRTLGLHNNRLAR------IPLLAV-RYLRNVTYLDLSSNRLSTLANDLTALWLFSDSNQTQRS 218

  Fly   120 -------DSGIYECQISTTPPIGHSV---------YLNIVEPVTDIIGGP--ELHINR------- 159
                   :..:.:|::||...|....         :|...||: |:.|.|  .:.::|       
Zfish   219 FVLGLQDNPWVC
DCRLSTLLDISRGPESSLVLLDRFLTCSEPL-DLAGVPFQSVELSRCRRPYVV 282

  Fly   160 ----------GSTINLTCIVKFAPEPPPTVIW--SHNREIIN----------------------- 189
                      |||:.|.|  :....|.|.::|  |..|.:.|                       
Zfish   283 TSATKITALLGSTVLLRC--EATGHPTPALMWIKSAKRNLYNQGCCKQTQSSLDTERFPKKLFGY 345

  Fly   190 -FDSPRGGI--SLVTEKGVLTTSRLLVQKAITQDSGLYTCTPSN----------ANPTSVRVHIV 241
             .:|||.|:  |:|:..|:..:           |:|.|.|...|          .|...|.....
Zfish   346 VQESPRVGVRWSVVSLNGISYS-----------DAGEYRCRAQNMAGISEAVVSLNVVGVMAEYT 399

  Fly   242 DGEHPAAMHTGNNGNSTASQPPVLLPLVLLTCSTLMLLQLVASCSTL--VPATPPGCRTVQQAST 304
            |.::.....|....:|..::|.       .....:|...:..|.|.|  |..||...|...:...
Zfish   400 DFKNSDQQQTTTKSDSKRTKPK-------QKSKAMMPRNMTGSLSPLKRVLKTPKAGRDKMKRDR 457

  Fly   305 FAEEK 309
            .|.:|
Zfish   458 TAVQK 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dpr8NP_001285239.1 IG_like 51..131 CDD:214653 20/82 (24%)
V-set 52..143 CDD:284989 23/103 (22%)
IG_like 153..238 CDD:214653 27/141 (19%)
ig 153..232 CDD:278476 25/135 (19%)
lrit3bXP_009305418.1 LRRNT 51..92 CDD:214470
leucine-rich repeat 69..89 CDD:275380
LRR_8 112..172 CDD:290566 4/10 (40%)
leucine-rich repeat 114..137 CDD:275378
leucine-rich repeat 138..161 CDD:275378 68/330 (21%)
LRR_8 160..214 CDD:290566 16/59 (27%)
LRR_4 160..201 CDD:289563 15/46 (33%)
leucine-rich repeat 162..185 CDD:275378 10/29 (34%)
leucine-rich repeat 186..199 CDD:275378 4/12 (33%)
leucine-rich repeat 215..230 CDD:275378 2/14 (14%)
Ig 278..391 CDD:299845 23/125 (18%)
I-set 279..391 CDD:254352 23/124 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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