DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9400 and AT3G09590

DIOPT Version :9

Sequence 1:	NP_572957.1	Gene:	CG9400 / 32385	FlyBaseID:	FBgn0030562	Length:	308	Species:	Drosophila melanogaster
Sequence 2:	NP_187570.1	Gene:	AT3G09590 / 820116	AraportID:	AT3G09590	Length:	186	Species:	Arabidopsis thaliana

Alignment Length:	224	Identity:	58/224 - (25%)
Similarity:	89/224 - (39%)	Gaps:	62/224 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    38 TITTTTPASSGGYCAAALCELYNGTHLVHVPH-TACGNNGSFSPACGPEPKLLEMSERRR--QLL 99
            ::|.:.|:|    |...|..|::|       | :..|.  |...|.....:|:..:.|.:  :..
plant     2 SVTLSHPSS----CLLLLFLLFSG-------HPSVLGT--SIPDAVNTAARLVNRARRAKLSREF 53

  Fly   100 LDMHNLARSKIASGNLDGYRSAAHMPLLRWDTELEQMAALHAKR----CQFAHDKCRNTPRFKFS 160
            |..||.||  ::||          :|.|.||.:|.:.|...||:    |...|.   ..|    .
plant    54 LQAHNDAR--VSSG----------VPTLGWDRDLARFADKWAKQRKSDCSMIHS---GGP----Y 99

  Fly   161 GQNIGYFWIGREFKSHSRRMKSF-----VINWFREHQDANQSFIDRYHPHPQGKKIGHFTLLVSD 220
            |:||  ||        .||.|::     |..||.|    ..::..:.:....||..||:|.:|..
plant   100 GENI--FW--------HRRKKTWSPEKVVTRWFEE----RFNYDVKTNTCAPGKMCGHYTQMVWR 150

  Fly   221 RVNRVGCAGVRFLEPKSNRFQFMLTCNYD 249
            ....||||.|:.    .|...:::.|.||
plant   151 ETTAVGCARVKC----HNGRGYLVVCEYD 175

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9400	NP_572957.1	SCP_euk	96..249	CDD:240180	43/163 (26%)
AT3G09590	NP_187570.1	CAP_PR-1	50..186	CDD:349400	45/163 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X35
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.920