DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9400 and CLEC18B

DIOPT Version :10

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_047302585.1 Gene:CLEC18B / 497190 HGNCID:33849 Length:481 Species:Homo sapiens


Alignment Length:219 Identity:54/219 - (24%)
Similarity:73/219 - (33%) Gaps:73/219 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PKLLE-------MSERRRQLLLDMHNLARSKIASGNLDGYRSAAHMPLLRWDTELEQMAALHAKR 143
            |:|.|       ::.:...|||.:||..||.:..       .||.|..|.|...|.|:|...|..
Human    31 PQLQEQAPMAGALNRKESFLLLSLHNRLRSWVQP-------PAADMRRLDWSDSLAQLAQARAAL 88

  Fly   144 CQFAHDKCRNTPRFKFSGQNIGYFW----IGREFKSHSRRMKSF---VINWFREHQDANQSFIDR 201
            |...      ||... ||     .|    :|...:.....:.||   |..||.|.|        |
Human    89 CGIP------TPSLA-SG-----LWRTLQVGWNMQLLPAGLASFVEVVSLWFAEGQ--------R 133

  Fly   202 YHPHPQGK-----KIGHFT-----LLVSDRVNRVGC------AGVRFLEPKSNRFQFMLTC---- 246
            | .|..|:     ...|:|     .||....:::||      ||...:|        ...|    
Human   134 Y-SHAAGECARNATCTHYTQVSVLQLVWATSSQLGCGRHLCSAGQTAIE--------AFVCAYSP 189

  Fly   247 --NYDYNNIFNEPIYQSGPAGSKC 268
              |::.|.....| |:.|...|.|
Human   190 GGNWEVNGKTIIP-YKKGAWCSLC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 CAP_euk 96..249 CDD:349399 45/181 (25%)
CLEC18BXP_047302585.1 CAP_euk 50..188 CDD:349399 44/173 (25%)
EGF_CA 235..266 CDD:238011
CLECT 315..439 CDD:153057
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.