DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9400 and CG42564

DIOPT Version :10

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_649651.2 Gene:CG42564 / 40788 FlyBaseID:FBgn0260766 Length:500 Species:Drosophila melanogaster


Alignment Length:311 Identity:74/311 - (23%)
Similarity:129/311 - (41%) Gaps:48/311 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 AVLLFVLA-CEKGLAGAQTLIETITTTTPA---------SSGG-----------------YCAAA 54
            |:::|::| |        ..|:|..||||:         |.||                 ||..:
  Fly     3 ALVVFLIASC--------LTIQTAATTTPSPAVTEAGHPSPGGSQGQEEPGNSSSTELPDYCDPS 59

  Fly    55 LCELYNGTHLVHVPHTACGNNGSFSPACGPEPKLLEMSERRRQLLLDMHNLARSKIASGNLDGYR 119
            ||.       ..:.|.||..:......|..:.:|:.:|.:..:.||...|..|..:|.|..:|..
  Fly    60 LCH-------KELKHVACNASIELHDKCSLDAELIVISPKVERFLLRRFNELRDSVAKGGFNGLS 117

  Fly   120 SAAHMPLLRWDTELEQMAALHAKRCQFAHDKCRNTPRFKFSGQNIGYFWIGREFKSHSRRMKSFV 184
            .|:.|..|:|:.||..:|..:.:.|...||:||||...:.:||.:||..|..:.......::..:
  Fly   118 PASRMGTLKWNPELAYLAEFNVRDCVLRHDECRNTKFTQNAGQTVGYRGIKGKLPELEDILRDII 182

  Fly   185 INWFREHQDANQSFIDRYHPHPQGKKIGHFTLLVSDRVNRVGCAGVRFLEPKSNRFQFMLTCNYD 249
            ..|.||....:...|.:|..........:|..:|.:....||||.|:  :.:....|....|||.
  Fly   183 GVWLREKSRTSMVNIMKYVEQESQSPKYNFLQIVLENAESVGCAIVQ--QSRHGWIQTFFACNYG 245

  Fly   250 YNNIFNEPIYQSGPAGSKCPQHRISEKFPSLCDWRDANNDLDSEESDEDGN 300
            :..:...|:|:.|...::..:...:.|:..||    |.:::..:.:.:.||
  Fly   246 HAPVVGSPVYEPGKKAAESCKTGANPKYAHLC----AESEVYEKVTPKAGN 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 CAP_euk 96..249 CDD:349399 41/152 (27%)
CG42564NP_649651.2 CAP_euk 95..245 CDD:349399 41/151 (27%)

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