DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9400 and Clec18a

DIOPT Version :9

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:222 Identity:54/222 - (24%)
Similarity:80/222 - (36%) Gaps:49/222 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 PEPK----LLEMSERRRQLLLDMHNLARSKIASGNLDGYRSAAHMPLLRWDTELEQMAALHAKRC 144
            |:||    |..:|.:...|:|..||..||::       :..||:|..:.|...|.|:|...|..|
Mouse   111 PQPKQDPTLQALSRKESFLILTAHNRLRSRV-------HPPAANMQRMDWSESLAQLAEARAALC 168

  Fly   145 -QFAHDKCRNTPRFKFSGQNIGYFWIGREFKSHSRRMKSFVINWFRE-----HQDANQSFIDRYH 203
             ........:||     |.|....|..:.....|......|..||.|     |.||..:      
Mouse   169 VTSVTPNLASTP-----GHNSHVGWNVQLMPMGSASFVEVVNLWFAEGLQYRHGDAECA------ 222

  Fly   204 PHPQGKKIGHFTLLVSDRVNRVGCAGVR-FLEPKSNRFQFMLTC------NYDYNNIFNEPIYQS 261
               ......|:|.||....:::||.... |::.::..   ...|      |:|.|.....| |:.
Mouse   223 ---HNATCAHYTQLVWATSSQLGCGRQPCFVDQEAME---AFVCAYSPGGNWDINGKTVAP-YKK 280

  Fly   262 GPAGSKCPQHRISEKFPS------LCD 282
            |...|.|.. |:|..|.:      ||:
Mouse   281 GTWCSLCTA-RVSGCFKAWDHAGGLCE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 SCP_euk 96..249 CDD:240180 37/165 (22%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 36/157 (23%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841163
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.850

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