DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9400 and CG4270

DIOPT Version :9

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster


Alignment Length:140 Identity:34/140 - (24%)
Similarity:55/140 - (39%) Gaps:36/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 YRSAAHMPLLRWDTELEQMAALHAKRCQ----FAHDKCRNTPRFKFSGQNIGYFWIGREFKSHSR 178
            ||:....|.:..:..|.::|...|...:    .||   |..|::   |:||        |.|...
  Fly    42 YRAMHGCPAVTINAALNKLAQEWANHLRDQNTMAH---RPNPKY---GENI--------FLSGGM 92

  Fly   179 RMKSF--VINWFRE--HQDANQSFIDRYHPHPQGKKIGHFTLLVSDRVNRVGCAGVRFLEPKSNR 239
            .:...  |..|:||  ..|.|::   ::.|     ..||||.|:......:|....|    |::|
  Fly    93 DVTGDLPVEMWYREINSYDFNKA---QFVP-----TAGHFTQLIWKSSVEMGSGVAR----KADR 145

  Fly   240 FQFMLTCNYD 249
              ..:.|||:
  Fly   146 --TWVVCNYN 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 SCP_euk 96..249 CDD:240180 33/138 (24%)
CG4270NP_608663.1 SCP_GAPR-1_like 31..158 CDD:240182 34/140 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455144
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
54.950

Return to query results.
Submit another query.