DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9400 and Clec18a

DIOPT Version :10

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:XP_038954172.1 Gene:Clec18a / 307851 RGDID:1559899 Length:497 Species:Rattus norvegicus


Alignment Length:198 Identity:49/198 - (24%)
Similarity:74/198 - (37%) Gaps:42/198 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 PKLLEMSERRRQLLLDMHNLARSKIASGNLDGYRSAAHMPLLRWDTELEQMAALHAKRCQFAHD- 149
            |.:..:|.:...|:|..||..||::       :.|||:|..:.|...|.|:|...|..|..:.. 
  Rat    65 PIVQALSRKESFLILTTHNRLRSQV-------HPSAANMQRMDWSESLAQLAQARAALCGTSATP 122

  Fly   150 ----KCRNTPRFKFSGQNIGYFWIGREFKSHSRRMKSF--VIN-WFREHQDANQSFIDRYHPHPQ 207
                ..||||..   |.|:....:|         ..||  |:| ||.|.........:..|    
  Rat   123 NLAATLRNTPDV---GWNVQLLPMG---------SASFVEVVNVWFAEGLQYRHGSAECAH---- 171

  Fly   208 GKKIGHFTLLVSDRVNRVGCAGVR-FLEPKSNRFQFMLTC------NYDYNNIFNEPIYQSGPAG 265
            .....|:|.||....:::||.... |::..:..   ...|      |::.|.....| |:.||..
  Rat   172 NATCAHYTQLVWATSSQLGCGWQPCFVDQVATE---AFVCAYSPGGNWEINGKMIAP-YKKGPWC 232

  Fly   266 SKC 268
            |.|
  Rat   233 SLC 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 CAP_euk 96..249 CDD:349399 40/167 (24%)
Clec18aXP_038954172.1 CAP_euk 77..211 CDD:349399 39/159 (25%)
CLECT 361..485 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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