DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9400 and scl-1

DIOPT Version :9

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:200 Identity:45/200 - (22%)
Similarity:69/200 - (34%) Gaps:34/200 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LLDMHNLARSKIASGN--LDGYRS--AAHMPLLRWDTELEQMAALHAKRCQFAHDKCRNTPRFKF 159
            ::|.||..||.||...  ..|.:.  |..|..:..|:.:...|..:|..|...|.|...      
 Worm    24 IVDAHNKLRSAIAKSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCPTGHSKGTG------ 82

  Fly   160 SGQNIGYFWIGREFKSHSRRMKSFVINWFREHQD----ANQSFIDRYHPHPQGKKIGHFTLLVSD 220
            .|:|:.:.|...:..|.....:.....|.:|.||    :|......::     ..|||.|.:...
 Worm    83 YGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKSNAMDTTLFN-----SGIGHATQMAWA 142

  Fly   221 RVNRVGC--------AGVRFLEPKSNRFQFMLTCNYD-YNNIFNEPIYQSGPAGSKCPQHRISEK 276
            ..:.:||        |.:|      |..:..:.|.|. ..|....|||:.|...|.|......:.
 Worm   143 NTSSIGCGVKNCGRDASMR------NMNKIAVVCQYSPPGNTMGRPIYKEGTTCSSCSGSTKCDT 201

  Fly   277 FPSLC 281
            ...||
 Worm   202 ASGLC 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 SCP_euk 96..249 CDD:240180 35/165 (21%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 36/166 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14643
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.070

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