DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9400 and scl-26

DIOPT Version :9

Sequence 1:	NP_572957.1	Gene:	CG9400 / 32385	FlyBaseID:	FBgn0030562	Length:	308	Species:	Drosophila melanogaster
Sequence 2:	NP_504963.1	Gene:	scl-26 / 183662	WormBaseID:	WBGene00016821	Length:	208	Species:	Caenorhabditis elegans

Alignment Length:	215	Identity:	44/215 - (20%)
Similarity:	78/215 - (36%)	Gaps:	58/215 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    90 EMSERRRQLLLDMHNLARSKIASG-----NLDGYRSAAHMPLLRWDTELEQMAALHAKRCQFAHD 149
            |.:|...:.|:.:||..|:..:.|     |:.   .:..|..|.|:..|    ...||...:..|
Worm    21 EWNETAIEGLVFVHNKLRNDASQGLWARHNIS---KSTDMQKLFWNNSL----VAEAKHEMYDCD 78

  Fly   150 KCRNTPRFKFSGQNIGYFWIGREFKSHSRRMKSFVINWFREHQDANQSFIDRYHPHPQGKKIGHF 214
            :...  |....|:|| |.:....:.....:.....||  ::..||..|          ..:...:
Worm    79 QLEK--RELTLGENI-YQYDVTTYDDVDGQQGEAAIN--KDSHDALSS----------KDQAAQY 128

  Fly   215 TL--LVSDRVNRVGC----------AGVRFLEPKSNRFQFMLTCNYD--YNNIFNEPIYQSG--- 262
            .|  ::..:.|.:||          .|..:    :.||   :.|.|.  ..|| ::.:|:.|
Worm   129 RLRQILYSKSNSIGCIYESCDRIDDEGTNY----NTRF---IICKYSPALKNI-DDQLYEEGEEA 185

  Fly   263 ----PAGSKC--PQHRISEK 276
                |:|:.|  |..::.||
Worm   186 CSNCPSGTSCTDPMMKLCEK 205

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9400	NP_572957.1	SCP_euk	96..249	CDD:240180	31/169 (18%)
scl-26	NP_504963.1	CAP_euk	30..168	CDD:349399	31/166 (19%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10334
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.020