DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9400 and Crispld2

DIOPT Version :10

Sequence 1:NP_572957.1 Gene:CG9400 / 32385 FlyBaseID:FBgn0030562 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_612527.2 Gene:Crispld2 / 171547 RGDID:620860 Length:497 Species:Rattus norvegicus


Alignment Length:269 Identity:68/269 - (25%)
Similarity:106/269 - (39%) Gaps:68/269 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 CGNNGSFSPACGPEPKLLE----------------MSERRRQLLLDMHNLARSKIASGNLDGYRS 120
            ||....|.|......:||.                ||:|:..|:|  ||..|.::       |..
  Rat    18 CGVQAFFLPNTMSLERLLSKYQHTEPHSRVRRAIPMSDRQEILML--HNKLRGQV-------YPP 73

  Fly   121 AAHMPLLRWDTELEQMAALHAKRCQFAHDKCRNTPRFKFSGQNIGYFWIGREFKSHSRRMKSFVI 185
            |::|..:.||.|||:.||..|:||.:.|.........   |||:...| || ::|....::|   
  Rat    74 ASNMEYMTWDEELERSAAAWAQRCLWEHGPASLLVSI---GQNLAVHW-GR-YRSPGFHVQS--- 130

  Fly   186 NWFREHQDANQSFIDRYHPHP-----------QGKKIGHFTLLVSDRVNRVGCA--GVRFLEPKS 237
             |:.|.:|..       :|:|           .|....|:|.:|....|::|||  ..|.:....
  Rat   131 -WYDEVKDYT-------YPYPHECNPWCPERCSGAMCTHYTQMVWATTNKIGCAVHTCRSMSVWG 187

  Fly   238 NRFQ--FMLTCNYD-YNNIFNEPIYQSGPAGSKCPQHRISEKFPSLCDWR----------DANND 289
            :.::  ..|.|||. ..|...|..|:.|...|:||.........:|| :|          |..|:
  Rat   188 DIWENAVYLVCNYSPKGNWIGEAPYKHGRPCSECPSSYGGGCRNNLC-YREEHYHQKPEVDEMNE 251

  Fly   290 LDSEESDED 298
            ::|..:.|:
  Rat   252 VESPPAPEE 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9400NP_572957.1 CAP_euk 96..249 CDD:349399 44/167 (26%)
Crispld2NP_612527.2 CAP 56..201 CDD:412178 45/169 (27%)
LCCL 286..370 CDD:128866
LCCL 389..488 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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