DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9400 and Crisp3

DIOPT Version :9

Sequence 1:	NP_572957.1	Gene:	CG9400 / 32385	FlyBaseID:	FBgn0030562	Length:	308	Species:	Drosophila melanogaster
Sequence 2:	NP_033769.1	Gene:	Crisp3 / 11572	MGIID:	102552	Length:	241	Species:	Mus musculus

Alignment Length:	208	Identity:	42/208 - (20%)
Similarity:	70/208 - (33%)	Gaps:	55/208 - (26%)

- Green bases have known domain annotations that are detailed below.

  Fly    86 PKLLEMSERRRQL-------------LLDMHNLARSKIASGNLDGYRSAAHMPLLRWDTELEQMA 137
            |.||:.:.:...|             ::..||..|.|::.       |.:.:..:.|:.:.:..|
Mouse    16 PSLLQDNSQENSLEKLSTSKKSVQEEIVSKHNQLRRKVSP-------SGSDLLNMEWNYDAQVNA 73

  Fly   138 ALHAKRCQFAHDKCR-NTPRFKFSGQNIGYFWIGREFKSHSRRMKSFVINWFREHQDANQSFIDR 201
            ...|.:|.|:|.... .|...| .|:|:       ...|:.....|.:..|:.|    ::..|..
Mouse    74 QQRADKCTFSHSPIELRTTNLK-CGENL-------FMSSYLVPWSSVIQGWYNE----SKGLIFG 126

  Fly   202 YHPHPQGKKIGHFTLLVSDRVNRVGCAGVRFLEPKSNRFQFMLTCNYDYNNIFNEPIYQSGPAGS 266
            ..|......:||.|.:|.....:|.| ||  .|...|..::...|.|
Mouse   127 VGPKQNVSVVGHHTQVVWKSNLQVAC-GV--AECPENPLRYFYVCRY------------------ 170

  Fly   267 KCPQHRISEKFPS 279
             ||....|..:||
Mouse   171 -CPVLNYSGHYPS 182

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9400	NP_572957.1	SCP_euk	96..249	CDD:240180	33/166 (20%)
Crisp3	NP_033769.1	SCP	37..172	CDD:294090	33/175 (19%)
Crisp3	NP_033769.1	Crisp	194..241	CDD:285731
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167841470
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X35
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.850