DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc12Ea and Prb3

DIOPT Version :9

Sequence 1:NP_001368944.1 Gene:Muc12Ea / 32384 FlyBaseID:FBgn0052602 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_631923.1 Gene:Prb3 / 245985 RGDID:620386 Length:350 Species:Rattus norvegicus


Alignment Length:287 Identity:70/287 - (24%)
Similarity:104/287 - (36%) Gaps:0/287 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   407 GTSAKPTTLKPTEGTSAKPTTLKPTAGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTE 471
            |...:|....|..|...:|....|..|...:|....|..|...:|....|.:|...:|....|..
  Rat    24 GHQTQPLPPHPDHGNQTQPRPPHPDIGNQTQPRPPHPDHGNQTQPRPPHPDQGNQTQPRPPHPDH 88

  Fly   472 GTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTEGTTAKPTTLKPTE 536
            |...:|....|.:|...:|....|..|...:|....|.:|...||...:|.:|....|....|..
  Rat    89 GNQTQPRPPHPDQGNQTQPRPPHPDHGNQTQPRPPHPDQGNQTQPRPPQPGQGNHTHPRPPHPDH 153

  Fly   537 GTSAQPTTLKPTKGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTE 601
            |...||....|.:|...:|....|..|...:|....|.:|...:|....|..|...:|....|.:
  Rat   154 GNQTQPHPPHPDQGNQTQPRPPHPDHGNQTQPRPPHPDQGNQTQPRPPHPDHGNQTQPRPPHPDQ 218

  Fly   602 GTTAKPTTLKPTEGTSAQPTTLKPTKGTTAKPTTLKPTEGTSAKPTTLKPTDGTTAKPTTLKPTE 666
            |...:|....|.:|...||....|.:|...:|....|.:|...:|....|..|...:|...:|.:
  Rat   219 GNQTQPRPPHPDQGNQTQPRPPHPDQGNQTQPRPPHPDQGNQTQPRPPHPDLGNQTQPRPPRPGQ 283

  Fly   667 GTSAKPTTLKPTEGTTAKPTTLKPTEG 693
            |...:|...:|.:|...:|....|.:|
  Rat   284 GNQTQPRPPRPGQGNQTQPRPPLPGQG 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc12EaNP_001368944.1 PHA03247 <175..670 CDD:223021 64/262 (24%)
PHA03247 <659..1197 CDD:223021 9/35 (26%)
PHA03247 <1049..1651 CDD:223021
PHA03247 <1723..2186 CDD:223021
PHA03247 <2110..2706 CDD:223021
Prb3NP_631923.1 Pro-rich 7..162 CDD:291893 34/137 (25%)
Suf <183..270 CDD:283497 21/86 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45842
orthoMCL 1 0.900 - - OOG6_122912
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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