DRSC/TRiP Functional Genomics Resources

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Protein Alignment Muc12Ea and Y46B2A.3

DIOPT Version :9

Sequence 1:NP_001368944.1 Gene:Muc12Ea / 32384 FlyBaseID:FBgn0052602 Length:3321 Species:Drosophila melanogaster
Sequence 2:NP_493835.1 Gene:Y46B2A.3 / 189942 WormBaseID:WBGene00021578 Length:1145 Species:Caenorhabditis elegans


Alignment Length:920 Identity:307/920 - (33%)
Similarity:396/920 - (43%) Gaps:134/920 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   419 EGTSAKPTTLK---------PTAGTTAKPTTLK---PTEGTSAKPT----TLKP---TEGTTAKP 464
            |..|.||..:.         .|.|||.....:|   .|.|.:.:||    |::.   |.|.|..|
 Worm   156 ESQSDKPNNVNMVCCSPWKVSTRGTTNTNRNIKAHETTRGFTQRPTAAGWTIRANGITRGQTRVP 220

  Fly   465 -TTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTEGTTAK 528
             ||.:||.    :|||...|.|  |..||...:.|.|.:|||.....|  |..||...:.|.|.:
 Worm   221 GTTREPTH----RPTTAGWTNG--ANGTTRDTSRGFTQRPTTAGWRNG--ANGTTRDTSRGFTQR 277

  Fly   529 PTTLKPTEGTSAQPTTLKPTKGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAK 593
            |||.....|  |..||:..::..|.:|||...|.|  |..||:..:.|.|.:|||...|.|  |.
 Worm   278 PTTAGWRNG--ANGTTIDTSREFTQRPTTAGWTNG--ANGTTIDTSRGFTQRPTTAGWTNG--AN 336

  Fly   594 PTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTKGTTAKPTTLKPTEGTSAKPTTLKPTDGTTAK 658
            .||:..:.|.|.:|||...|.|  |..||:..::..|.:|||...|.|  |..||:..:.|.|.:
 Worm   337 GTTIDTSRGPTHRPTTAGWTNG--ANGTTIDTSREFTQRPTTAGWTNG--ANGTTIDTSRGPTHR 397

  Fly   659 PTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTDGTTAKPTTLKLTEGTSAK 723
            |||.....|  |..||...:.|.|.:|||.....|  |..||:..:...|.:|||...|.|  |.
 Worm   398 PTTAGWRNG--ANGTTRDTSRGFTQRPTTAGWRNG--ANGTTIDTSREFTQRPTTAGWTNG--AN 456

  Fly   724 PTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTKGTTAK 788
            .||:..:.|.|.:|||...|.|  |..||...:.|.|.:||....|.|  |..||:..::|.|.:
 Worm   457 GTTIDTSRGFTQRPTTAGWTNG--ANGTTSGTSRGFTQRPTIAGWTNG--ANGTTIDTSRGFTQR 517

  Fly   789 PTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAK 853
            |||...|.|  |..||...:.|.|.:||....|.|.:.      .|.|.|..|.|   |.|.|.:
 Worm   518 PTTAGWTNG--ANGTTSGTSRGFTQRPTIAGWTNGANG------ITRGQTRVPGT---TRGPTHR 571

  Fly   854 PTTLKPTDGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAKPTTLKPTDGTTAK 918
            |||...|:|  |..||...:.|.:.:|||...|.|  |..||...:.|.|.:||....|:|  |.
 Worm   572 PTTAGWTNG--ANGTTRDTSRGFTQRPTTAGWTNG--ANGTTSGTSRGFTQRPTIAGWTNG--AN 630

  Fly   919 PTTLKPTEGTSAKPTTLKPTDGTTAKSTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAK 983
            .||:..:.|.:.:|||...|:|  |..||...:.|.:.:||....|.|  |..||...:.|.|.:
 Worm   631 GTTIDTSRGFTQRPTTAGWTNG--ANGTTSGTSRGFTQRPTIAGWTNG--ANGTTSGTSRGFTQR 691

  Fly   984 PTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAQPTTLKPTEGTSAKPTTLKPTDGTTAK 1048
            |||...|.|  |..||...:.|.|.:|||...|.|.:.      .|.|||.         |.|.:
 Worm   692 PTTAGWTNG--ANGTTSGTSRGFTQRPTTAGWTNGANG------TTSGTSR---------GFTQR 739

  Fly  1049 PTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAK 1113
            ||....|.|.:.      .|.|.|..|.|                |.|.|.:|||...|.|  |.
 Worm   740 PTIAGWTNGANG------ITRGQTRVPGT----------------TRGPTHRPTTAGWTNG--AN 780

  Fly  1114 PTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAKPTTLKPTEGTSAK 1178
            .||...:.|.|.:|||...|.|  |..||...:.|.|.:||....|.|  |..||...:.|.:.:
 Worm   781 GTTRDTSRGFTQRPTTAGWTNG--ANGTTSGTSRGFTQRPTIAGWTNG--ANGTTSGTSRGFTQR 841

  Fly  1179 PTTLKPTEGTTAKPTTLNQLRERVPSQHFEPTEGTTAKPTTLKPTEGTTAKPTTLKPTKGTTAKS 1243
            ||    ..|.|.:...:.:.:.|||.    .|.|.|.:|||...|.|  |..||...::|.|.:.
 Worm   842 PT----AAGWTIRANGITRGQTRVPG----TTRGPTHRPTTAGWTNG--ANGTTRDTSRGFTRRP 896

  Fly  1244 TTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTSAKPTTLKPTEGTTAKPTTLKPTEGTTAKP 1308
            ||...|.|  |..||...:.|.|.:||....|.|  |..||...:.|...:||....|.|...  
 Worm   897 TTAGWTNG--ANGTTSGTSRGFTQRPTAAGWTNG--ANGTTSGTSRGFAQRPTAAGWTNGANG-- 955

  Fly  1309 TTLKPTEGTS 1318
                .|.|||
 Worm   956 ----TTSGTS 961

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Muc12EaNP_001368944.1 PHA03247 <175..670 CDD:223021 92/270 (34%)
PHA03247 <659..1197 CDD:223021 178/537 (33%)
PHA03247 <1049..1651 CDD:223021 85/270 (31%)
PHA03247 <1723..2186 CDD:223021
PHA03247 <2110..2706 CDD:223021
Y46B2A.3NP_493835.1 VMO-I 34..170 CDD:238135 4/13 (31%)
VOMI 34..170 CDD:281719 4/13 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14598
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R16987
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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