DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1461 and T04F3.1

DIOPT Version :9

Sequence 1:NP_001285238.1 Gene:CG1461 / 32381 FlyBaseID:FBgn0030558 Length:501 Species:Drosophila melanogaster
Sequence 2:NP_001256363.1 Gene:T04F3.1 / 179608 WormBaseID:WBGene00011436 Length:3460 Species:Caenorhabditis elegans


Alignment Length:605 Identity:111/605 - (18%)
Similarity:197/605 - (32%) Gaps:228/605 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 FANESQFRYQSSRNRASCTSRSPSEPESPAPVTPNCDVVDQALAELQLQS--------------- 54
            |...|..:..||.|..:..::|.::|         |   |:.|.|::::|               
 Worm  2932 FVEPSVSKSDSSANIKASQNKSTTKP---------C---DEELLEIEIKSEYFLIKGSYSLLIPK 2984

  Fly    55 --------QDIRKQQDLVDTTATSSSSRKRSGWEIKGSKLSLN--------------------TH 91
                    |.:|:|.   |:.||...|..|     |..||.:|                    ..
 Worm  2985 SDPLGKMLQKLREQN---DSLATLDFSLTR-----KLKKLLVNCIREKAGSLDMVSMSSQYEGLS 3041

  Fly    92 NRIRNIVESLK------IKPNPEK--PMIPLSIGDPTTFGNLKAADETMKAVL------------ 136
            :|.::::||:.      :|.|.:|  |     ..:|....|...|:..:...|            
 Worm  3042 SRGQSLIESIDHASATFLKMNVDKYEP-----TRNPNGVVNFCTAENNICTPLLEDRFKHLELFF 3101

  Fly   137 ----HSLESGKYNGYASTQGHEIARKAVAKYSAHQRPDGEIDANEVVLCSGCSSALE---YCILA 194
                |.:......|:..|      |:.:.||.......| :..:|:||.:...:..:   ||:..
 Worm  3102 PNIEHLVRYPPAGGWPET------RRVLVKYFKEFMGAG-VTIDELVLTASTRTGYDVTSYCLFE 3159

  Fly   195 LAD---------RGQNVLVPRPGFCLYYTLAQGLD---IEVRYYDLLPDQQWRADLVQLESLIDE 247
            ..|         .|....|.....|....:...|.   ::|:.|:...::|     :.||:.:  
 Worm  3160 QDDILLTNGPIYTGTISNVQEKAQCQVVCVETDLSNPRLDVKMYEAELNRQ-----IALENTV-- 3217

  Fly   248 NTAALLINNPSNPCGSVFDEKHLRELIAIC---ERHYLPIIADEIYEHFVFPGSKHLAVSSLTTE 309
              :.::|.||.||.|..|..:   ::|::|   ....|.::.||::.:.||        ..|.::
 Worm  3218 --SGVIIVNPHNPLGVTFPPE---QVISLCNWASSKNLRVVIDEVFANSVF--------DKLNSK 3269

  Fly   310 V-PVLS-------------CGGLTKRFLVPGWRMGWIIVHDRKNRLRDAIVGLKNMCGRILGSNT 360
            . |.||             ...::|.|.:||  :.:.::|.....|..|...|            
 Worm  3270 FRPFLSYRHRLHRPDSVAWLWSVSKDFGLPG--LKFAVIHTTNEGLCQAATKL------------ 3320

  Fly   361 IIQGALPDILTKTPQSYF-------DGVIDVLHSNAMLA-------------YKM----LKQVRG 401
                          |.|:       |..:::|..:..|.             |:.    ||::. 
 Worm  3321 --------------QMYYPCSPFVQDFAVNLLSDSEWLREFHREVNKRISIHYRYTSDNLKRLE- 3370

  Fly   402 LDPVMPNGAMYMMIGVSIERFPEFKDDTHFVQ----------EMVNEQSVFCLPG---SCFEYPG 453
             .|.:|..|     |:.:  |.:|  ..|...          |.:.|..|...||   .|..: |
 Worm  3371 -IPFIPAQA-----GIFV--FADF--SKHLTSLDSVGELALFERLAEAGVMLTPGVHQKCHVF-G 3424

  Fly   454 YVRIVLTVPGAMIEEACSRI 473
            :.|||.......:||...|:
 Worm  3425 WFRIVFACTKEELEEGFRRL 3444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1461NP_001285238.1 tyr_amTase_E 79..481 CDD:273529 91/508 (18%)
AAT_like 112..475 CDD:99734 80/447 (18%)
T04F3.1NP_001256363.1 PTZ00121 <1134..1515 CDD:173412
SMC_N 1346..2197 CDD:308206
AAT_like 3076..3444 CDD:99734 78/434 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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