DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD12 and ftz

DIOPT Version :10

Sequence 1:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens
Sequence 2:NP_477498.1 Gene:ftz / 40834 FlyBaseID:FBgn0001077 Length:410 Species:Drosophila melanogaster


Alignment Length:285 Identity:70/285 - (24%)
Similarity:113/285 - (39%) Gaps:75/285 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    20 SPDSFYFSNLRPNGGQLAALPPISYPRGALPWAATP-ASCAPAQPAGATAFGGFSQPYLAGSGPL 83
            |...:|::|......|  .:||:.      |....| |:...|:...|:......:         
  Fly    57 SESCYYYNNQEQVTTQ--TVPPVQ------PTTPPPKATKRKAEDDAASIIAAVEE--------- 104

Human    84 GLQPPTAK---DGPEEQAKFYAPE------------AAAGPEERGRTRPSFAPESSLAPAVAALK 133
              :|.|.:   ..|.::.| |.|:            .|...:......||:..|....|..:|.:
  Fly   105 --RPSTLRALLTNPVKKLK-YTPDYFYTTVEQVKKAPAVSTKVTASPAPSYDQEYVTVPTPSASE 166

Human   134 AAKY----------------DYAGVGRATPGSTTLLQG---APCAPGFKDDTKGPLNLNMTVQAA 179
            ...|                |:|.....||.|...|:|   .|.:||.|..:.....:|..:..|
  Fly   167 DVDYLDVYSPQSQTQKLKNGDFATPPPTTPTSLPPLEGISTPPQSPGEKSSSAVSQEINHRIVTA 231

Human   180 GVASCLRPSLPDG---LPWG------AAPGR-ARKKRKPYTKQQIAELENEFLVNEFINRQKRKE 234
                      |:|   ..|.      |:..: :::.|:.||:.|..|||.||..|.:|.|::|.:
  Fly   232 ----------PNGAGDFNWSHIEETLASDCKDSKRTRQTYTRYQTLELEKEFHFNRYITRRRRID 286

Human   235 LSNRLNLSDQQVKIWFQNRRMKKKR 259
            ::|.|:||::|:||||||||||.|:
  Fly   287 IANALSLSERQIKIWFQNRRMKSKK 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122 4/31 (13%)
Homeodomain 203..259 CDD:459649 28/55 (51%)
ftzNP_477498.1 FTZ 1..248 CDD:397787 40/220 (18%)
Homeodomain 255..311 CDD:459649 28/55 (51%)
KLF1_2_4_N <321..404 CDD:425360
Blue background indicates that the domain is not in the aligned region.

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