DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXD12 and scro

DIOPT Version :10

Sequence 1:NP_067016.3 Gene:HOXD12 / 3238 HGNCID:5135 Length:270 Species:Homo sapiens
Sequence 2:NP_001015473.1 Gene:scro / 3355151 FlyBaseID:FBgn0287186 Length:468 Species:Drosophila melanogaster


Alignment Length:267 Identity:61/267 - (22%)
Similarity:106/267 - (39%) Gaps:77/267 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    14 SLLNLQSPDSFYFSNLRPNGGQLAALPPISYPRGALPWAATPASCAPAQPAGATAFGGFSQPYLA 78
            |:.::.||....:..|..||.     ||       .|:.:..:|.:...| |.......:.||..
  Fly   117 SVTDILSPIEESYRKLELNGN-----PP-------SPFRSNSSSSSINSP-GTLTTSTMANPYAM 168

Human    79 GSGPLGLQPPTAKDGPEEQAKFYAP--EAAAGPEERGRTRPSFAPESSLAPAVAALKAAKYDYAG 141
            |:                  .:::|  :...||.:          ..|||.....::.:...|  
  Fly   169 GT------------------LYHSPGVQTYCGPTD----------NLSLAGHYTDMRNSASWY-- 203

Human   142 VGRATPGSTTLLQGAPCAPGFKDDTKGPLNLNMTVQA----------AGVASCLRPSLPDGLPWG 196
                  |||.            :|.:..::..|:..|          :|:|:|   |:.|..|..
  Fly   204 ------GSTA------------NDPRFAISRLMSSSASGTMSHMGNMSGLAAC---SVSDSKPLQ 247

Human   197 AAPGRARKKRKPYTKQQIAELENEFLVNEFINRQKRKELSNRLNLSDQQVKIWFQNRRMKKKRVV 261
            ....:.||:|..:|:.|:.|||..|....:::..:|:.|::.::|:..||||||||.|.|.||..
  Fly   248 FPLAQRRKRRVLFTQAQVYELERRFKQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQA 312

Human   262 LREQALA 268
             :|:|:|
  Fly   313 -KEKAMA 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXD12NP_067016.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..122 3/21 (14%)
Homeodomain 203..259 CDD:459649 22/55 (40%)
scroNP_001015473.1 Homeodomain 254..310 CDD:459649 22/55 (40%)

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