DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRNA-cap and CEG1

DIOPT Version :10

Sequence 1:NP_572952.1 Gene:mRNA-cap / 32379 FlyBaseID:FBgn0030556 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_011385.3 Gene:CEG1 / 852747 SGDID:S000003098 Length:459 Species:Saccharomyces cerevisiae


Alignment Length:456 Identity:125/456 - (27%)
Similarity:174/456 - (38%) Gaps:144/456 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 VPGVRQVSDQPRLGDLQRKVQDWCDWKK--NGFPGAQPVSMDRENI-KRLSEIPYRVSWKADGTR 334
            :||:.|..:..:  ||:..|....:..|  ..|||:||||....:: ::|....|.|..|.||.|
Yeast    13 IPGLIQPGNVTQ--DLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLR 75

  Fly   335 YMMLI-----DGRDEVYFFDRNHSCFQVENVTF-----VESRNLNEHL-DGTLVDGEMVLD---- 384
            .:|.|     .|....:..||.::.:.|....|     .:...|.|.| ||||:|||:|:.    
Yeast    76 VLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPM 140

  Fly   385 -KIGETVTPRYLIYDIVRLSNRDVRDEP---------------------FYPNRLDYIKTEVIGP 427
             |:.|.   |||::|.:.::.|.:...|                     .||||....      |
Yeast   141 TKLQEL---RYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTF------P 196

  Fly   428 RILGMKHGIINQRLQAFSVRGKDF-WDIWMSARLLGEKFSRTLAHEPDGLIFQPSKQPYTA-GTC 490
            ..:.|||              .|| :.:...|:.|.:     |.|..|||||.|.|.|||| |..
Yeast   197 FKISMKH--------------MDFSYQLVKVAKSLDK-----LPHLSDGLIFTPVKAPYTAGGKD 242

  Fly   491 SDVFKWKPHELNSVDFRLKIITERGE--------------GLLTKKVGFLYV--GG--------- 530
            |.:.||||.:.|:|||:|.:.....|              ....|.|..|||  ||         
Yeast   243 SLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKH 307

  Fly   531 HDAPYGR----------------------MQRLTKETRELDNRIVECTMNQ-FGNWDFMRERTDK 572
            .|.|:.|                      .|.|....:.|:.|||||..|| .|.|:.:|.|.||
Yeast   308 FDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDK 372

  Fly   573 KNPNSYNTARSVVDSIKHPVTKEYL---------------LNFIASSGYRNDHVMMPPPINSHNQ 622
            .|.|..:..:.|::||...|:.|.|               .|....||         .|:.|.:|
Yeast   373 LNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG---------RPLPSQSQ 428

  Fly   623 N 623
            |
Yeast   429 N 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRNA-capNP_572952.1 Mce1_N 18..185 CDD:350502
mRNA_cap_enzyme 307..497 CDD:396068 65/229 (28%)
mRNA_cap_C 502..597 CDD:461093 39/142 (27%)
CEG1NP_011385.3 CEG1 1..449 CDD:227551 125/456 (27%)
Blue background indicates that the domain is not in the aligned region.

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