DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRNA-cap and dusp11.2

DIOPT Version :9

Sequence 1:NP_572952.1 Gene:mRNA-cap / 32379 FlyBaseID:FBgn0030556 Length:649 Species:Drosophila melanogaster
Sequence 2:XP_012821815.1 Gene:dusp11.2 / 448150 XenbaseID:XB-GENE-5742800 Length:633 Species:Xenopus tropicalis


Alignment Length:689 Identity:148/689 - (21%)
Similarity:243/689 - (35%) Gaps:175/689 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LPNRWLYCPRKSDTIIAERFLAFKTPLSNNFHDKMPIECTFQPEMLFEYCKTLKVKLGLWVDLTN 79
            :|.||.........|...||:|||.||....:.::.....|.|:.|....::....|||.:||||
 Frog     7 IPGRWRSLTAVGQRIPGSRFIAFKVPLKGQANQRVTPTQKFTPKDLLTEVRSRDEDLGLIIDLTN 71

  Fly    80 TKRFY-DRSAVEELGAKYIKLQCRGHGETPSPEQTHSFIEIVDNFI-----NERPFDVIAVHCTH 138
            |:|:| |:.....:  :||||...|. :.|.....|.|..||..||     |::   :|.||||.
 Frog    72 TERYYTDKDLPRSV--QYIKLYTAGL-QIPEDATIHQFKRIVRRFIWQNTDNDK---LIGVHCTT 130

  Fly   139 GFNRTGFLIVCYLVERLDCSVSAALAIFASARPPGI----YKQDYINELYKRYEDTNAAPAAPEQ 199
            |.||||:||..||::........|:..||.||...|    |.:|.:|              .|.:
 Frog   131 GINRTGYLICRYLIDVDGWDPDTAVNAFAQARGHPIEGVVYTEDLLN--------------GPTR 181

  Fly   200 PNWCLDYDDGNGDGFVQDNSSSTSQQAGEQDDDAEEVEGEDAGGDCDASTSDGQPRKKRRREMII 264
            .|..:|                             :...|||..:..:...|.:|.|:...:...
 Frog   182 SNLGID-----------------------------QPPSEDAPSELYSQLEDWRPEKQSALQRTQ 217

  Fly   265 KNATFMAGVPG---VRQVSDQPRLGDLQRKVQDWCDWKKNGFPGAQPVSMDRENIKRLSEIPYRV 326
            ::  |:|...|   .|::...|.|...:.|.....:..|: |....|..::|..|.|..|...:.
 Frog   218 RD--FVADDYGDFDARKLPLPPPLPTERPKPTKLFEDDKD-FLTTMPEYIERVRIARALERQKQE 279

  Fly   327 SWKADGTRYMMLIDGRDEVYFFDRNHSCFQVENVTFVESRNLNEHLDGTLVDGEMVLDKIGETVT 391
            :.|....|                 .|..........|......:|:.:|..|:           
 Frog   280 ALKISAIR-----------------ESTLPAHETNTSELHQKRNYLNSSLTSGQ----------- 316

  Fly   392 PRYLIYDIVRLSNRDVRDEPFYPNRLDYIKTEVIGPRILGMKHGIINQRLQAFSVRGKDFWDIWM 456
            |:..:|:.|.....::|       |...:::|  ..|::..:...::...:..|:.||.      
 Frog   317 PQPRVYNSVAEITEEIR-------RNRSMQSE--SGRLVESQSRSVSGSKEDMSLDGKH------ 366

  Fly   457 SARLLGEKFSRTLAHEPDGLIFQPSKQP-------------YTAGTCSDVFKWKPHELNSVDFRL 508
                  |:|........|.:|.....|.             |:..|......:..|..:..:|..
 Frog   367 ------ERFDYCSRRTMDRIIPANGSQSLEFSQRMGVRHNNYSDATPGPAAPYSSHPKSVQNFTA 425

  Fly   509 KII-TERGEGLLTKKVGFLYVGGHD-----APYGR--MQRLTKETRELDNRIVECTMNQFGNWDF 565
            ::. |:.|:....::  |.|....|     ||..|  ::...::|..|::.| ..:.|:......
 Frog   426 EMYKTDSGKTDTQRQ--FQYQHASDFSTNMAPLDRNELRFGERQTYNLNSNI-PTSRNELQQLLE 487

  Fly   566 MRERTDKKNPNSYNTARSV---------VDSI----KHPVTKEYLLN---FIASS----GYRNDH 610
            |:.|:.::.|..|...|.|         :|.:    ||...|::|:|   |:.||    |..|  
 Frog   488 MQARSRQEIPGLYQREREVALGTLHGQRIDGLSDVRKHQEEKQFLMNKVKFMNSSESAAGTSN-- 550

  Fly   611 VMMPPPINSHNQN--------HNHNHFYPHGHGQHQRRP 641
                ..|.|..:.        |..|.|.|:   |...||
 Frog   551 ----YDIRSFQERSTIPTADFHGTNRFSPY---QPPMRP 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRNA-capNP_572952.1 PTPc <116..171 CDD:304379 24/59 (41%)
mRNA_cap_enzyme 307..497 CDD:279649 29/202 (14%)
mRNA_cap_C 502..597 CDD:281856 23/115 (20%)
dusp11.2XP_012821815.1 PTPc 62..165 CDD:304379 43/108 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1544021at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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