DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRNA-cap and ceg1

DIOPT Version :9

Sequence 1:NP_572952.1 Gene:mRNA-cap / 32379 FlyBaseID:FBgn0030556 Length:649 Species:Drosophila melanogaster
Sequence 2:NP_595708.1 Gene:ceg1 / 2540362 PomBaseID:SPBC2F12.08c Length:402 Species:Schizosaccharomyces pombe


Alignment Length:386 Identity:113/386 - (29%)
Similarity:173/386 - (44%) Gaps:101/386 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   273 VPGVRQVSDQPRLGDLQRKVQDWCDWKKNGFPGAQPVSMDRENIKRLSEIPYRVSWKADGTRYMM 337
            ||||....|..|:  |:.::........:.|||:||||..:::::.|.|..|.|..|:||.|.::
pombe    13 VPGVLAPRDDVRV--LKTRIAKLLGTSPDTFPGSQPVSFSKKHLQALKEKNYFVCEKSDGIRCLL 75

  Fly   338 LI------DGRDEVYFFDRNHSCFQVENVTF-VESRNLNE--HLDGTLVDGEMVLDKIGETVTP- 392
            .:      :.|..||.|||..:.:.||.:.: ||:....:  |:| ||:|||:|||     :.| 
pombe    76 YMTEHPRYENRPSVYLFDRKMNFYHVEKIFYPVENDKSGKKYHVD-TLLDGELVLD-----IYPG 134

  Fly   393 -----RYLIYDIVRLSNRDVRDEPFYPNRL-----------------DYIKTEV----IGPRILG 431
                 |||::|.:..      |...|.:||                 :|.||.:    |.|.:..
pombe   135 GKKQLRYLVFDCLAC------DGIVYMSRLLDKRLGIFAKSIQKPLDEYTKTHMRETAIFPFLTS 193

  Fly   432 MK-----HGIINQRLQAFSVRGKDFWDIWMSARLLGEKFSRTLAHEPDGLIFQPSKQPYTAGTCS 491
            :|     |||:                     :|..|...| |.|..|||||..::.||.:||..
pombe   194 LKKMELGHGIL---------------------KLFNEVIPR-LRHGNDGLIFTCTETPYVSGTDQ 236

  Fly   492 DVFKWKPHELNSVDFRLKI-ITERGEGLLTKKV------------------GFLYVGGHDAPYGR 537
            .:.||||.|:|::||.||: ..:..||.:....                  .|:||...:     
pombe   237 SLLKWKPKEMNTIDFMLKLEFAQPEEGDIDYSAMPEFQLGVWEGRNMYSFFAFMYVDEKE----- 296

  Fly   538 MQRLTKETRELDNRIVECTMNQFGNWDFMRERTDKKNPNSYNTARSVVDSIKHPVTKEYLL 598
            .::|......|..|||||.::....|.|:|.|.||::.|..:|.:||:.||:..|:||.||
pombe   297 WEKLKSFNVPLSERIVECYLDDENRWRFLRFRDDKRDANHISTVKSVLQSIEDGVSKEDLL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRNA-capNP_572952.1 PTPc <116..171 CDD:304379
mRNA_cap_enzyme 307..497 CDD:279649 65/230 (28%)
mRNA_cap_C 502..597 CDD:281856 32/113 (28%)
ceg1NP_595708.1 CEG1 1..402 CDD:227551 113/386 (29%)
mRNA_cap_enzyme 45..242 CDD:279649 65/230 (28%)
mRNA_cap_C 247..356 CDD:281856 32/113 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 65 1.000 Domainoid score I2828
eggNOG 1 0.900 - - E1_COG5226
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I1477
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003817
OrthoInspector 1 1.000 - - oto101841
orthoMCL 1 0.900 - - OOG6_101990
Panther 1 1.100 - - LDO PTHR10367
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R688
SonicParanoid 1 1.000 - - X2661
TreeFam 00.000 Not matched by this tool.
1110.890

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