DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and RAD7

DIOPT Version :10

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_012586.1 Gene:RAD7 / 853512 SGDID:S000003813 Length:565 Species:Saccharomyces cerevisiae


Alignment Length:509 Identity:112/509 - (22%)
Similarity:186/509 - (36%) Gaps:138/509 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   191 PPPLDSRRFAPSLKK----TTMLTKTLR------IDFNHSRLNYYTEIDAIMLCGRTVTKTQNLL 245
            |..|.|.....||.|    |..:.:..|      .|....|:|..:.:.:  ||   :||....:
Yeast   121 PVSLSSANDRESLTKKRQNTAKIIQNRRRKRKRAADLLDRRVNKVSSLQS--LC---ITKISENI 180

  Fly   246 AKQQITQHSRTLVSPPPDAIGSTSGDGSGGSISHKLRTLKFQPNCGEDGATKLHEFINNDLSQFL 310
            :|.|                  ...|.|...:.:|||.:     .|......|     |:|::.|
Yeast   181 SKWQ------------------KEADESSKLVFNKLRDV-----LGGVSTANL-----NNLAKAL 217

  Fly   311 ADNCVDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLLYAEISLKPYW 375
            :.|          ..|.|...::.|:    .|||.|        ||.|.|:       ||...| 
Yeast   218 SKN----------RALNDHTLQLFLK----TDLKRL--------TFSDCSK-------ISFDGY- 252

  Fly   376 DVASSELLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRGDNLTHLRLNSCKFLNASCIE 440
                    .|||..:..|.:|.|..||...:    |...::.::..||..|.|:....:|....|
Yeast   253 --------KTLAIFSPHLTELSLQMCGQLNH----ESLLYIAEKLPNLKSLNLDGPFLINEDTWE 305

  Fly   441 NVGIVCDNLIE---LSLRNCATEPPLLNF-----SCLANLKNLERLDLFQTY------------- 484
            ...::....:|   :|..:..|:..|.|.     |.|.:| .|.|||....|             
Yeast   306 KFFVIMKGRLEEFHISNTHRFTDKSLSNLLINCGSTLVSL-GLSRLDSISNYALLPQYLVNDEFH 369

  Fly   485 ------------FETELLLSML-EGNRKLKHLNLAFCGVSVNMDNVAAHLATY---NTQLISLDL 533
                        ...|:::::| :..|.|:.|.|..| :.:....:...|..:   ...|..|.|
Yeast   370 SLCIEYPFNEEDVNDEIIINLLGQIGRTLRKLVLNGC-IDLTDSMIINGLTAFIPEKCPLEVLSL 433

  Fly   534 WKAHFLSSRGLQ---SLARLHQLEELDLGWCMREASLGD-GLFQLLSNCPK--LKKLFLSAVRGT 592
            .::..:::..|.   |...|:.|.|.....|::   ||| .:.:||.|..:  |:.|.|::::..
Yeast   434 EESDQITTDSLSYFFSKVELNNLIECSFRRCLQ---LGDMAIIELLLNGARDSLRSLNLNSLKEL 495

  Fly   593 TERDLMHIAALGKNLEQLDLMGILNITHERVYDIL-VNCPKLQLLDLSFCDNIM 645
            |:...:.:|.  .||..||| |.:....:.|..:| ...|.|.::|: |.||::
Yeast   496 TKEAFVALAC--PNLTYLDL-GFVRCVDDSVIQMLGEQNPNLTVIDV-FGDNLV 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..370 CDD:463757 11/43 (26%)
leucine-rich repeat 393..422 CDD:275381 6/28 (21%)
leucine-rich repeat 423..442 CDD:275381 5/18 (28%)
LRR <427..>639 CDD:443914 55/255 (22%)
leucine-rich repeat 449..474 CDD:275381 8/32 (25%)
leucine-rich repeat 475..499 CDD:275381 7/49 (14%)
leucine-rich repeat 500..527 CDD:275381 5/29 (17%)
leucine-rich repeat 528..552 CDD:275381 6/26 (23%)
leucine-rich repeat 553..580 CDD:275381 9/27 (33%)
leucine-rich repeat 581..606 CDD:275381 5/24 (21%)
leucine-rich repeat 607..632 CDD:275381 7/25 (28%)
leucine-rich repeat 633..652 CDD:275381 5/13 (38%)
RAD7NP_012586.1 AMN1 228..440 CDD:187754 51/245 (21%)
leucine-rich repeat 236..261 CDD:275381 13/48 (27%)
leucine-rich repeat 262..287 CDD:275381 6/28 (21%)
leucine-rich repeat 288..340 CDD:275381 10/51 (20%)
leucine-rich repeat 342..365 CDD:275381 7/23 (30%)
leucine-rich repeat 368..397 CDD:275381 2/28 (7%)
leucine-rich repeat 398..426 CDD:275381 5/28 (18%)
leucine-rich repeat 428..455 CDD:275381 6/26 (23%)
leucine-rich repeat 456..475 CDD:275381 6/21 (29%)
leucine-rich repeat 484..507 CDD:275381 5/24 (21%)
leucine-rich repeat 508..533 CDD:275381 7/25 (28%)

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