DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and KDM2B

DIOPT Version :9

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_011537169.1 Gene:KDM2B / 84678 HGNCID:13610 Length:1353 Species:Homo sapiens


Alignment Length:490 Identity:97/490 - (19%)
Similarity:163/490 - (33%) Gaps:163/490 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 EATESDLSRPPPLDSR--RFAPSLKKTTMLTKTLRIDFNHSRLNYYTEIDAIMLCGRTVTKTQNL 244
            |:...:..|||.:..|  ||:..|..|   .:.||.....|          :....|.:::....
Human   981 ESEGEEPKRPPGICERPHRFSKGLNGT---PRELRHQLGPS----------LRSPPRVISRPPPS 1032

  Fly   245 LAKQQITQHSRTL-----VSPPPDAIGSTSGDGSGGSISHKLRTLKFQPNCGEDGATK-LHEFIN 303
            ::..:..|..|.:     :|||||::..                        :|||.. :|.   
Human  1033 VSPPKCIQMERHVIRPPPISPPPDSLPL------------------------DDGAAHVMHR--- 1070

  Fly   304 NDLSQFLADNCVDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLLYAE 368
                                        |:.:.:.|||..:.|.....|.||:........|:..
Human  1071 ----------------------------EVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTR 1107

  Fly   369 ISLKPYWDVASSELLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRGDNLTHLRLNSCKF 433
            |.|. :....:..:|..:.||..:  .|||||.    |:|..:. .:|..|...|..|.|:.|.:
Human  1108 IDLN-HCKSITPLMLSGIIRRQPV--SLDLSWT----NISKKQL-SWLINRLPGLRDLVLSGCSW 1164

  Fly   434 LNASCIENVGIVCDNLIELSLRNCATEPPL---LNFSCLANLKNLERLDLFQTYFETELLLSMLE 495
            :..|.:                 |::..||   |:...:..||:.:..|          |||...
Human  1165 IAVSAL-----------------CSSSCPLLRTLDVQWVEGLKDAQMRD----------LLSPPT 1202

  Fly   496 GNRKLKHLNLAFCGVSVNMDNVAAHLATYNTQLISLDLWKAHF-LSSRGLQSLARLHQLEELDLG 559
            .||            ...|||.:........:|..||:..|.. |..|.:..|::||      |.
Human  1203 DNR------------PGQMDNRSKLRNIVELRLAGLDITDASLRLIIRHMPLLSKLH------LS 1249

  Fly   560 WC--MREASLGDGLFQLLSNCPKLKKLFLSAVRGTTERDLMHIAALGKNLEQLDLMGILNITHER 622
            :|  :.:.|:.                .|:|| |||.||         :|.:::|.....:| ::
Human  1250 YCNHVTDQSIN----------------LLTAV-GTTTRD---------SLTEINLSDCNKVT-DQ 1287

  Fly   623 VYDILVNCPKLQLLDLSFCDNIMDRDFD-LLAEWS 656
            .......|..:..:||.:|..:.....: .:||.|
Human  1288 CLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMS 1322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..372 CDD:289689 10/45 (22%)
leucine-rich repeat 393..422 CDD:275381 9/28 (32%)
leucine-rich repeat 423..442 CDD:275381 5/18 (28%)
LRR_RI 437..>641 CDD:238064 42/209 (20%)
leucine-rich repeat 449..474 CDD:275381 5/27 (19%)
leucine-rich repeat 475..499 CDD:275381 5/23 (22%)
leucine-rich repeat 500..527 CDD:275381 3/26 (12%)
leucine-rich repeat 528..552 CDD:275381 8/24 (33%)
AMN1 552..>660 CDD:187754 21/108 (19%)
leucine-rich repeat 553..580 CDD:275381 3/28 (11%)
leucine-rich repeat 581..606 CDD:275381 8/24 (33%)
leucine-rich repeat 607..632 CDD:275381 4/24 (17%)
leucine-rich repeat 633..652 CDD:275381 3/19 (16%)
KDM2BXP_011537169.1 JmjC 182..257 CDD:214721
cupin_like 229..335 CDD:304367
zf-CXXC <615..651 CDD:251032
PHD_KDM2B 661..722 CDD:277114
F-box-like 1071..1111 CDD:289689 10/39 (26%)
leucine-rich repeat 1105..1129 CDD:275381 5/24 (21%)
AMN1 1121..1310 CDD:187754 59/267 (22%)
leucine-rich repeat 1130..1153 CDD:275381 9/29 (31%)
leucine-rich repeat 1154..1177 CDD:275381 6/39 (15%)
leucine-rich repeat 1178..1217 CDD:275381 12/60 (20%)
leucine-rich repeat 1218..1242 CDD:275381 6/23 (26%)
leucine-rich repeat 1243..1272 CDD:275381 14/60 (23%)
leucine-rich repeat 1273..1297 CDD:275381 4/24 (17%)
leucine-rich repeat 1298..1323 CDD:275381 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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