DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and AT2G36370

DIOPT Version :9

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_565845.3 Gene:AT2G36370 / 818210 AraportID:AT2G36370 Length:940 Species:Arabidopsis thaliana


Alignment Length:763 Identity:144/763 - (18%)
Similarity:239/763 - (31%) Gaps:327/763 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LPKLETHDYVVVYFEEFVVPTEVAIFETFNPGAVVRIWAYGLTKNWTCLWEATESDLSRPPPLDS 196
            |||:|..|                         :::||::||.                    .:
plant   146 LPKVELSD-------------------------LIQIWSFGLE--------------------HA 165

  Fly   197 RRFAPS-----LKKTTMLTKTLRIDFN-----------HSRLNYYTEIDAI-------------- 231
            ..|.|.     |.|..||.|:.:...|           |..|..::|:|.:              
plant   166 GEFVPDLCVAYLAKNFMLVKSDKYFGNVPYELLMWCVKHPHLTVHSEMDLVDGLLIWLDAGGRLS 230

  Fly   232 -------------------------MLCGRTVTKTQNLLAKQQITQHSRTLVSPPPDAIGSTSGD 271
                                     .:.||:.:...:..|.|.|...::.:..|....:.|.: |
plant   231 DLPESSQDNTINLMEQVRFSLLPLWFIAGRSKSHGFSKFADQSIELVTKLMKMPSTCLVDSLT-D 294

  Fly   272 GSGGSISHKLRTLKFQPNCGEDGATKLHE------------FIN----NDLSQFLADNCVDGEAA 320
            |....:  ::|..::.......|..:|:|            |.|    ..|..|| .|..|.|..
plant   295 GPPTDV--RVRLTEYSEILDLSGCPQLNEASLLLSILPNSYFANLRWRKSLESFL-KNPDDDERH 356

  Fly   321 APQICLTDLPFEILLRILSYLDLKSLFRVGHVSRTFYDISRHPLLYAEISLKPY----------- 374
            ..||....||      |||:..:|.:           |||:...|..::.:|.:           
plant   357 QEQISHRTLP------ILSFESVKEI-----------DISKCQRLDYKVVIKCFSKSFPSLRKLR 404

  Fly   375 ----WDVASSELLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRG----DNLTHLRLNSC 431
                .::..|.|| .|......|.::||:  .....:.|.:...|.:.:|    .::|.|.|...
plant   405 AAYLLNIKVSTLL-ELLLNFRELTEVDLT--VDVSPIIPVQASVFYSGQGHCLLSSITRLTLEGR 466

  Fly   432 KFLNASCIENVGIVCDNLIELSLRNCATEPPLLNFSCLANL----KNL----------------- 475
            ..:....:.::..||::|..|:::.||    ||:.:|:|::    |.|                 
plant   467 SDICDMELRSISRVCESLCYLNIKGCA----LLSDACIASVIQRCKKLCSLIVCYTSFSENSILA 527

  Fly   476 ---------ERLDL------FQTYF--------ETELLLSMLEGNRKLKHLNLAFCGVSVNMDNV 517
                     |.:|:      .||..        ||. ||:::..::|:|.|.|....||   |:|
plant   528 LCATISMTNEHMDINSVASNLQTLHMSKCEGISETS-LLNLITHSQKMKSLCLRDTKVS---DSV 588

  Fly   518 AAHLATYNTQLISLDL------WKA-----------HFLSSRGLQSLARLH-------------- 551
            .....  .:.|.:||:      |.|           ..|.:||.::|.:|.              
plant   589 LCEFP--GSTLEALDISNTTISWMALARVISRNPNLKTLKARGCKNLLQLEVDGRTDNFSPLVSG 651

  Fly   552 -----------QLEELDLGW--------CMRE-------------ASLGDGLFQLL-SNC----- 578
                       .||||::||        .:|.             ||||:.:.:|| |.|     
plant   652 QEVFKCLSKGSGLEELEIGWGFSYFSFESLRPAASFLRVISVGLGASLGEDVLKLLPSTCPLLES 716

  Fly   579 --------------------------------------------PKLKKLFLSAV-RGTTERDLM 598
                                                        |.|:||.|..| |..|..||:
plant   717 IVLHFQEISDSALTSVLTSLKHLQELALSYCFGEISLQSFKFSMPNLRKLRLERVTRWMTNDDLL 781

  Fly   599 HIAALGKNLEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNIMD 646
            .:.....||.:|.|:|.|::|.:....|....|.:..|.|..|.:|.:
plant   782 VLTQSCPNLTELSLVGCLHLTSDCQPIISAGWPGMISLHLEECGSITE 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..372 CDD:289689 10/45 (22%)
leucine-rich repeat 393..422 CDD:275381 6/32 (19%)
leucine-rich repeat 423..442 CDD:275381 3/18 (17%)
LRR_RI 437..>641 CDD:238064 74/361 (20%)
leucine-rich repeat 449..474 CDD:275381 8/28 (29%)
leucine-rich repeat 475..499 CDD:275381 9/63 (14%)
leucine-rich repeat 500..527 CDD:275381 7/26 (27%)
leucine-rich repeat 528..552 CDD:275381 10/65 (15%)
AMN1 552..>660 CDD:187754 38/167 (23%)
leucine-rich repeat 553..580 CDD:275381 15/97 (15%)
leucine-rich repeat 581..606 CDD:275381 9/25 (36%)
leucine-rich repeat 607..632 CDD:275381 7/24 (29%)
leucine-rich repeat 633..652 CDD:275381 4/14 (29%)
AT2G36370NP_565845.3 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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