DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and fbxl9

DIOPT Version :10

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_001339819.4 Gene:fbxl9 / 799466 ZFINID:ZDB-GENE-030131-7165 Length:644 Species:Danio rerio


Alignment Length:436 Identity:108/436 - (24%)
Similarity:155/436 - (35%) Gaps:133/436 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 LPFEILLRILSYLDLKSLFRVGHVSRTFYD---------------------------ISRHP--- 363
            ||.||:..|.|:|.:........|.:::|:                           ::|||   
Zfish     6 LPSEIITYIFSFLHVMDRKEASLVCKSWYNASQDYPFKRNLTFKFPASSSSLGFIRGLARHPRCG 70

  Fly   364 ---------------LLYAEISLKPYWD--------VASSELLCTLARRATMLRKLDLS------ 399
                           ||...:.|.|..|        :..|.|| .|..|.|.||||||.      
Zfish    71 LVISHLDGSSVSRQVLLEVGLHLGPRLDSLALPGSSITESCLL-ELLPRLTSLRKLDLQGLDSLF 134

  Fly   400 WCGGFGNVSPTEFKKFLTQRGDNLTHLRLNSCKFLNASCIENVGIVCDNLIELSLRNCATE---- 460
            ..|.|  :|..|.::.:.:...||..|.|::.::|:......:.|....|..|||..|...    
Zfish   135 MSGAF--LSREEHRRKVYRALLNLEELNLSNLRYLSDLSFNRLTICTPGLRRLSLSGCHISFEFD 197

  Fly   461 -----PPLLNFSCLANLKN-----------LERLDLFQTYFETELL--LSMLEGNRKLKHLNLAF 507
                 |.....|.|.:|:|           |..|||.:|....:.|  :|.|.|.| |:.|||..
Zfish   198 PYRGCPVGSGSSALVSLRNLLNLLQKQTSTLRSLDLSRTGITPKSLRSISKLRGLR-LEELNLHG 261

  Fly   508 C----GVSVNMDNVAAHLATYNTQLISLDL-----------------------------WKAHFL 539
            |    ..|:.:      |..|.:.|..|||                             ||   :
Zfish   262 CKELTDYSIEI------LCKYQSGLRMLDLSGCMELSCRAVLAVGAELKELRVLSFSQDWK---I 317

  Fly   540 SSRGLQSLARLHQLEELDLGWCMREASLGDGLFQLLSNC-PKLKKLFLSAVRGTTERDLMHIA-- 601
            :.:||..|..|..|..|||..|:..:  |..|.:.||.. |:.:...||....|..||.:..:  
Zfish   318 TDKGLAELMMLPHLRSLDLSECLHVS--GTELVKGLSGPEPRAQVETLSLRNCTYIRDSVVFSLA 380

  Fly   602 -ALGKNLEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNIMD 646
             .||.:|.:|||...:.:|...|..|....|.|.:|.|.:|..|.|
Zfish   381 QLLGVHLRELDLSSCVYLTDLSVRAIATFLPALLVLRLGWCKEISD 426

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..370 CDD:463757 14/85 (16%)
leucine-rich repeat 393..422 CDD:275381 10/34 (29%)
leucine-rich repeat 423..442 CDD:275381 4/18 (22%)
LRR <427..>639 CDD:443914 68/270 (25%)
leucine-rich repeat 449..474 CDD:275381 9/33 (27%)
leucine-rich repeat 475..499 CDD:275381 9/25 (36%)
leucine-rich repeat 500..527 CDD:275381 8/30 (27%)
leucine-rich repeat 528..552 CDD:275381 10/52 (19%)
leucine-rich repeat 553..580 CDD:275381 9/27 (33%)
leucine-rich repeat 581..606 CDD:275381 7/27 (26%)
leucine-rich repeat 607..632 CDD:275381 7/24 (29%)
leucine-rich repeat 633..652 CDD:275381 6/14 (43%)
fbxl9XP_001339819.4 F-box_SF 5..37 CDD:459239 9/30 (30%)
leucine-rich repeat 71..96 CDD:275381 3/24 (13%)
RNA1 <91..334 CDD:444072 64/255 (25%)
leucine-rich repeat 97..121 CDD:275381 6/24 (25%)
leucine-rich repeat 122..179 CDD:275381 16/58 (28%)
leucine-rich repeat 182..227 CDD:275381 10/44 (23%)
AMN1 215..427 CDD:187754 60/224 (27%)
leucine-rich repeat 228..253 CDD:275381 9/24 (38%)
leucine-rich repeat 254..277 CDD:275381 7/28 (25%)
leucine-rich repeat 280..305 CDD:275381 4/24 (17%)
leucine-rich repeat 306..325 CDD:275381 4/21 (19%)
leucine-rich repeat 331..359 CDD:275381 10/29 (34%)
leucine-rich repeat 360..386 CDD:275381 7/25 (28%)
leucine-rich repeat 387..412 CDD:275381 7/24 (29%)
leucine-rich repeat 413..497 CDD:275381 6/14 (43%)
AMN1 <498..613 CDD:187754
leucine-rich repeat 498..522 CDD:275381
leucine-rich repeat 523..548 CDD:275381
leucine-rich repeat 549..574 CDD:275381
leucine-rich repeat 575..598 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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