DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and Fbxl3

DIOPT Version :9

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001347270.1 Gene:Fbxl3 / 50789 MGIID:1354702 Length:428 Species:Mus musculus


Alignment Length:510 Identity:97/510 - (19%)
Similarity:167/510 - (32%) Gaps:185/510 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 RIWAYGLTKNWT------CLWEATESDLSRPPPLDSRRFAPSLKKTTMLTKTLRIDFNHSRLNYY 225
            |..|..:.:||.      .||...|.:|::|        |.|..|.|           |..    
Mouse    56 RAHASQVCRNWNQVFHMPDLWRCFEFELNQP--------ATSYLKAT-----------HPE---- 97

  Fly   226 TEIDAIMLCGRTVTKTQNLLAKQQITQHSRTLVSPPPDAIGSTSGDGSGGSISHKLRTLKFQPNC 290
                               |.||.|.:|                        |:.|:.:.|:.:.
Mouse    98 -------------------LIKQIIKRH------------------------SNHLQYVSFKVDS 119

  Fly   291 GEDGATKLHEFINNDLSQFLADNCVDGEAAAPQICLTDLPFEILLRILSYLDLKSLFRVGHVSRT 355
            .::.|    |...:.|||.:  ||                           .||:|..:.....:
Mouse   120 SKESA----EAACDILSQLV--NC---------------------------SLKTLGLISTARPS 151

  Fly   356 FYDISRHPLLYAEISLKPYWDVASSELLCTLARRATMLRKLDLSWCGGFGNVSPTEFKKFLTQRG 420
            |.|:.:...:.|...:     ..:|:.|.:|        |:|.:      .|.....|..:....
Mouse   152 FMDLPKSHFISALTVV-----FVNSKSLSSL--------KIDDT------PVDDPSLKVLVANNS 197

  Fly   421 DNLTHLRLNSCKFLNASCIENVGIVCDNLIELSLRNCATEPPLLNFSCLANLKNLERLDLFQTYF 485
            |.|..|:::||..::.:.|..|...|..|.||:          ||:..|::              
Mouse   198 DTLKLLKMSSCPHVSPAGILCVADQCHGLRELA----------LNYHLLSD-------------- 238

  Fly   486 ETELLLSM-LEGNRKLKHLNLAFCGVSVNMDNVAAHLATYNTQLISLDLWKAHFLSSRGLQSLAR 549
              ||||:: .|.:.:|:||.:         |.|:.:....:...|....|.|....|..:..:..
Mouse   239 --ELLLALSSEKHVRLEHLRI---------DVVSENPGQTHFHTIQKSSWDAFIKHSPKVNLVMY 292

  Fly   550 LHQLEE--------------LDLGWCMREASLGDGLFQLLSNCPKLKKLFLSA--VRGTTERDLM 598
            ....||              |..|..:.:..||    ::...||:|.:|.:.|  :|...| :|:
Mouse   293 FFLYEEEFDPFFRYEIPATHLYFGRSVSKDVLG----RVGMTCPRLVELVVCANGLRPLDE-ELI 352

  Fly   599 HIAALGKNLEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNIM--DRDFDL 651
            .||...|||..:.| |...::.....:.:..|.. :|..||..:.::  |:.:.|
Mouse   353 RIAERCKNLSAIGL-GECEVSCSAFVEFVKMCGG-RLSQLSIMEEVLIPDQKYSL 405

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..372 CDD:289689 6/45 (13%)
leucine-rich repeat 393..422 CDD:275381 4/28 (14%)
leucine-rich repeat 423..442 CDD:275381 5/18 (28%)
LRR_RI 437..>641 CDD:238064 48/220 (22%)
leucine-rich repeat 449..474 CDD:275381 6/24 (25%)
leucine-rich repeat 475..499 CDD:275381 5/24 (21%)
leucine-rich repeat 500..527 CDD:275381 5/26 (19%)
leucine-rich repeat 528..552 CDD:275381 4/23 (17%)
AMN1 552..>660 CDD:187754 27/118 (23%)
leucine-rich repeat 553..580 CDD:275381 7/40 (18%)
leucine-rich repeat 581..606 CDD:275381 8/26 (31%)
leucine-rich repeat 607..632 CDD:275381 4/24 (17%)
leucine-rich repeat 633..652 CDD:275381 5/21 (24%)
Fbxl3NP_001347270.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
F-box-like 36..77 CDD:315592 5/20 (25%)
LRR 1 119..146 10/59 (17%)
leucine-rich repeat 174..199 CDD:275381 6/38 (16%)
LRR 2 181..207 5/31 (16%)
leucine-rich repeat 200..225 CDD:275381 7/24 (29%)
LRR 3 208..233 8/34 (24%)
LRR 4 234..259 9/49 (18%)
leucine-rich repeat 252..286 CDD:275381 9/42 (21%)
leucine-rich repeat 287..333 CDD:275381 7/49 (14%)
LRR 5 316..341 7/28 (25%)
leucine-rich repeat 334..360 CDD:275381 8/26 (31%)
LRR 6 343..368 9/26 (35%)
leucine-rich repeat 361..383 CDD:275381 3/22 (14%)
LRR 7 369..394 4/25 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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