DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and LOC4577562

DIOPT Version :10

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_001238345.2 Gene:LOC4577562 / 4577562 VectorBaseID:AGAMI1_013227 Length:646 Species:Anopheles gambiae


Alignment Length:423 Identity:89/423 - (21%)
Similarity:156/423 - (36%) Gaps:120/423 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 DLPFEILLRILSYL-----DLKSL-------------------FRVGHVS------------RTF 356
            :||.||||.|..:|     |..:|                   |....||            |:|
Mosquito    76 NLPMEILLNIFRFLNGVDRDAAALTCKRWFDAMGYREFLDEVCFHFEEVSICDGTPPIALFLRSF 140

  Fly   357 YDISRHPLL------YAEISLKPYWDVASSEL----LC-----TLARRATMLRKLDLSWCGG--- 403
            ...|...|.      |.|     :|||....|    .|     |.::...:|::|....|..   
Mosquito   141 RHFSNIKLTRVQFNGYCE-----FWDVFGEYLREITFCNCITLTKSKLTMILKRLPFLECLALEE 200

  Fly   404 ----FGNVSPTEFKK-------------------------FLTQRGDNLTHLRLNSC-KFLNASC 438
                |...:|.|.|:                         :|...|.|::.|.::.| |.::|. 
Mosquito   201 ADEFFKTWTPVELKRIEPVCRCLRKLALRKSNAFTVDHLYYLVAMGPNISALEISKCLKQIDAP- 264

  Fly   439 IENVGIVCDNLIELSLRNCATEPPLLNFSC----------LANLKNLERLDLFQTYFETEL---- 489
             ..|.|:...|..:.:|....:  .::||.          .|.::|:....:..::||...    
Mosquito   265 -TRVKILTTILTIMKMRKKKLQ--AVDFSYTMYDDLFLKQFAEIENMSLSQISLSFFERAPIKDP 326

  Fly   490 -LLSMLEGNRKLKHLNL-AFCGVSVNMDNVAAHLATYNTQLISLDLWKAHFLSSRGLQSLARLHQ 552
             ::.:|.....:.||:| :|..::   |.....::|....|.:|.|.....|:..|::|:.:|.:
Mosquito   327 GIIDILRCQSAIVHLDLSSFLNLT---DFALIEISTSLRLLKTLKLNGCWLLTDFGVESIYKLDR 388

  Fly   553 LEELDLGWCMREASLG--DGLFQLLSNCPKLKKLFLSAVRGTTERDLMHIAALGKNLEQLDLMG- 614
            |:.|||..|.:.:..|  ..:.....:|  :.:|:||.:.|.|:..::.|.....||..:|..| 
Mosquito   389 LQVLDLSDCDKISDRGFMKAIVDRRRDC--MSQLYLSMLPGLTDSVILKICLTLLNLTVIDFCGS 451

  Fly   615 -ILNITHERVYDILVNCPKLQLLDLSFCDNIMD 646
             .:|.|..:.....:.|  |::|.|:.|..|.|
Mosquito   452 DCMNDTSVQFLFCYLKC--LRILRLNGCVKISD 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..370 CDD:463757 19/83 (23%)
leucine-rich repeat 393..422 CDD:275381 9/60 (15%)
leucine-rich repeat 423..442 CDD:275381 4/19 (21%)
LRR <427..>639 CDD:443914 49/232 (21%)
leucine-rich repeat 449..474 CDD:275381 5/34 (15%)
leucine-rich repeat 475..499 CDD:275381 3/28 (11%)
leucine-rich repeat 500..527 CDD:275381 6/27 (22%)
leucine-rich repeat 528..552 CDD:275381 7/23 (30%)
leucine-rich repeat 553..580 CDD:275381 7/28 (25%)
leucine-rich repeat 581..606 CDD:275381 6/24 (25%)
leucine-rich repeat 607..632 CDD:275381 6/26 (23%)
leucine-rich repeat 633..652 CDD:275381 6/14 (43%)
LOC4577562XP_001238345.2 None

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