DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fbxl4 and CG9003

DIOPT Version :10

Sequence 1:NP_572951.1 Gene:Fbxl4 / 32378 FlyBaseID:FBgn0030555 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001097271.1 Gene:CG9003 / 36244 FlyBaseID:FBgn0033639 Length:651 Species:Drosophila melanogaster


Alignment Length:506 Identity:117/506 - (23%)
Similarity:205/506 - (40%) Gaps:92/506 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 TTMLTKTLRIDFNHSRLNYYTEIDAIMLCGRTVTKTQNLLAKQQITQHSRTL-------VSPPPD 263
            |.:.:.|.|.:.|.:..|     .::.|.|...:.|:...:.....|||.:.       :||||.
  Fly    77 TAVSSATDRSNNNGNNHN-----PSLQLNGNGGSNTRQHSSGSNSRQHSSSSSNSNSSNISPPPS 136

  Fly   264 AIGSTSGDGSGGSISHKL---------RTLKFQPNCGEDGATKLHE-----FINNDLSQFLADNC 314
            :..|:..:.:..:.|..:         |:..|      ..||.:..     .||..:.:..:|:|
  Fly   137 SSSSSRSNNNNNNHSSNIISGFCSTIWRSATF------GSATPVINPLPAVSINPKIMESSSDSC 195

  Fly   315 VDGEAAAPQICLTD---------------------------------LPFEILLRILSYLDLKSL 346
            ....:..|.:.|.|                                 ||.|:|||:.||||:.||
  Fly   196 SLSSSTTPDVGLADQQRNMAGSAQDQSEDQSQTFLGATELDDELIKQLPKEVLLRVFSYLDVVSL 260

  Fly   347 FRVGHVSRTFYDISRHPLLYAEISLKPYWDVASSELLCTLARRAT-MLRKLDLSWCGGFGNVSPT 410
            .|...|.:.:..::.....:.:|:|..:.......::..:::|.. .|:.|.|..|...|:.|  
  Fly   261 CRCAQVCKYWNVLALDGSSWQKINLFDFQRDIEGPVIENISQRCRGFLKSLSLRGCQSVGDQS-- 323

  Fly   411 EFKKFLTQRGDNLTHLRLNSCKFLNASCIENVGIVCDNLIELSLRNCA--TEPPL--LNFSCLAN 471
              .:.|.....|:.||.|:.||.:.....:::...|..|..::|.:|:  |:..|  |:..|   
  Fly   324 --VRTLANHCHNIEHLDLSDCKKITDISTQSISRYCSKLTAINLHSCSNITDNSLKYLSDGC--- 383

  Fly   472 LKNLERLDLFQTYFETEL-LLSMLEGNRKLKHLNLAFCGVSVNMDNVAAHLATYNTQLISLDLWK 535
             .||..:::...:..:|. :.::..|..||:..:...| ..:| ||....||.|...|:.|:|..
  Fly   384 -PNLMEINVSWCHLISENGVEALARGCVKLRKFSSKGC-KQIN-DNAIMCLAKYCPDLMVLNLHS 445

  Fly   536 AHFLSSRGLQSL-ARLHQLEELDLGWCMREASLGD-GLFQLLSNCPKLKKLFLSAVRGTTERDLM 598
            ...::...::.| |..|:|::|.:..|   |.|.| .|..|..:...|..|.:|..|..|:   :
  Fly   446 CETITDSSIRQLAANCHKLQKLCVSKC---ADLTDLTLLSLSQHNHLLNTLEVSGCRNFTD---I 504

  Fly   599 HIAALGKN---LEQLDLMGILNITHERVYDILVNCPKLQLLDLSFCDNIMD 646
            ...|||:|   ||::||.....||...:..:...||.|:.|.||.|:.|.|
  Fly   505 GFQALGRNCKYLERMDLEECSQITDLTLAHLATGCPSLEKLTLSHCELITD 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fbxl4NP_572951.1 F-box-like 326..370 CDD:463757 16/76 (21%)
leucine-rich repeat 393..422 CDD:275381 7/28 (25%)
leucine-rich repeat 423..442 CDD:275381 5/18 (28%)
LRR <427..>639 CDD:443914 57/221 (26%)
leucine-rich repeat 449..474 CDD:275381 7/28 (25%)
leucine-rich repeat 475..499 CDD:275381 3/24 (13%)
leucine-rich repeat 500..527 CDD:275381 8/26 (31%)
leucine-rich repeat 528..552 CDD:275381 5/24 (21%)
leucine-rich repeat 553..580 CDD:275381 8/27 (30%)
leucine-rich repeat 581..606 CDD:275381 8/24 (33%)
leucine-rich repeat 607..632 CDD:275381 7/24 (29%)
leucine-rich repeat 633..652 CDD:275381 7/14 (50%)
CG9003NP_001097271.1 F-box_FBXL2-like 237..281 CDD:438887 14/43 (33%)
leucine-rich repeat 280..307 CDD:275381 3/26 (12%)
AMN1 <308..453 CDD:187754 37/154 (24%)
leucine-rich repeat 308..327 CDD:275381 6/22 (27%)
leucine-rich repeat 334..359 CDD:275381 6/24 (25%)
leucine-rich repeat 360..385 CDD:275381 7/28 (25%)
leucine-rich repeat 386..411 CDD:275381 3/24 (13%)
AMN1 <409..586 CDD:187754 47/155 (30%)
leucine-rich repeat 412..437 CDD:275381 8/26 (31%)
leucine-rich repeat 438..463 CDD:275381 5/24 (21%)
leucine-rich repeat 464..515 CDD:275381 17/56 (30%)
leucine-rich repeat 516..541 CDD:275381 7/24 (29%)
leucine-rich repeat 542..561 CDD:275381 7/14 (50%)
leucine-rich repeat 571..595 CDD:275381
leucine-rich repeat 596..621 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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